DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and LOC1273500

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:XP_312480.5 Gene:LOC1273500 / 1273500 VectorBaseID:AGAMI1_000448 Length:404 Species:Anopheles gambiae


Alignment Length:390 Identity:83/390 - (21%)
Similarity:116/390 - (29%) Gaps:172/390 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 SKAPKKPPFTYTELIEYALEDKGE--LTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFR 458
            |...:|||::|..|...|:....|  |:::.|||:|:||||||::|..||:||:|||||.|..|.
Mosquito     8 SYGDQKPPYSYISLTAMAIWSSPEKMLSLNDIYQFITDRFPYYRTNTQRWQNSLRHNLSFNDCFI 72

  Fly   459 KGVKAPQ--GAGHLWAI--SSGDSAENVLAWEHKKQ-------------------RLDLFFKMES 500
            |..:.|.  |.|..|.:  .:.|..:|......:|:                   .::.||..:|
Mosquito    73 KVPRRPDRPGKGAYWTLHPKAFDMFQNGSLLRRRKRFKLHQTDKECLNEEFIALANMNRFFMAQS 137

  Fly   501 INRERIQQHQQ------------------------------------------------------ 511
            ........|:.                                                      
Mosquito   138 TGAPTYHHHEHPAAGYYPPLVEPLGGGGSSSISPGGMVYAPISPPLSPPDDLAGTPHTGTESPVT 202

  Fly   512 ----------------------------------------------------QQQLQQHQQQHQQ 524
                                                                .|..||||.:|.:
Mosquito   203 VPTLPAVPTATATTTTTVPPKPKRSFTIESLIEPDSSSSSDSEESTDRAQPPYQLQQQHQLEHLR 267

  Fly   525 HSPQQK---------------QHSAAQQQHMPQASSCMYDEAAVAVATLTQEMMQTNSGGG---- 570
            |..||:               ||...||||          :||||.|......:.|..||.    
Mosquito   268 HLSQQQLVSNLTAFNEYAAAVQHHQQQQQH----------QAAVAAAAAAAAALGTTYGGSVPLH 322

  Fly   571 ----------STETSQQQQQQQQHHHHHSHQNHQNHNQHHQRLLPFNDLLSDDELRKTAGQILNG 625
                      |..|.........:||||.|.:|.:|:.|...|.|.:  ||.......|....||
Mosquito   323 PLLLPLGKMQSPATYFLHSGPAPYHHHHHHPHHHHHHHHLAHLYPGH--LSAGSAAAVAAATTNG 385

  Fly   626  625
            Mosquito   386  385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 35/75 (47%)
LOC1273500XP_312480.5 None

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