DRSC/TRiP Functional Genomics Resources

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Protein Alignment fd3F and Foxj1

DIOPT Version :10

Sequence 1:NP_001356931.1 Gene:fd3F / 31336 FlyBaseID:FBgn0264954 Length:764 Species:Drosophila melanogaster
Sequence 2:NP_446284.2 Gene:Foxj1 / 116557 RGDID:621764 Length:421 Species:Rattus norvegicus


Alignment Length:362 Identity:83/362 - (22%)
Similarity:125/362 - (34%) Gaps:131/362 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 RIQSAGRRTSSGSVSGANEATEADFEDKNLSWLLNFKFDEFPHLSPHNQIHGQAVNLPEGSAPPH 278
            |:..||....:|...|..|....|....:|.||..|..           ::.:|..||.|...||
  Rat     7 RLCGAGPGEEAGPEGGMEEPDALDDSLTSLQWLQEFSI-----------LNAKAPTLPPGGTDPH 60

  Fly   279 ----------PPSTAVPIATSPCSSSSPSSASAASASASAISTNQSLGSGLVDQRARSPKSCSSA 333
                      |.|   |:|..|.....|.:....::|.    |::|...||   :|..|.....|
  Rat    61 GYHQVPGLVAPGS---PLAADPACLGQPHTPGKPTSSC----TSRSAPPGL---QAPPPDDVDYA 115

  Fly   334 AMPAALGGGGNGSAGASAAGGVAGVGSTKTGRKFEELVMEVTSELDGNDMIVAEHVVVEDTSSKA 398
            ..|                                                   ||         
  Rat   116 TNP---------------------------------------------------HV--------- 120

  Fly   399 PKKPPFTYTELIEYALE--DKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGV 461
              |||::|..||..|::  ...::|:|.||:||:|.|.|::..|..|:||:|||||:|..|   :
  Rat   121 --KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRHNLSLNKCF---I 180

  Fly   462 KAPQ-----GAGHLWAISSGDSAENVLAWEHKKQRLDLFFKMESINRERIQQ------------- 508
            |.|:     |.|..|.|.. ..||.:|:...||:||.......:..|:..|:             
  Rat   181 KVPREKDEPGKGGFWRIDP-QYAERLLSGAFKKRRLPPVHIHPAFARQAAQEPSTAPWGGPLTVN 244

  Fly   509 HQQQQQLQQHQQQ--------------HQQHSPQQKQ 531
            .:.||.||:.::.              |::..|..|:
  Rat   245 REAQQLLQEFEEATGEGGWGTGEGRLGHKRKQPLPKR 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fd3FNP_001356931.1 Forkhead 401..473 CDD:459732 32/78 (41%)
Foxj1NP_446284.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..110 8/37 (22%)
FH_FOXJ1 121..199 CDD:410797 33/80 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..277 1/20 (5%)

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