DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HIP-R and TOM71

DIOPT Version :9

Sequence 1:NP_001014719.2 Gene:HIP-R / 31335 FlyBaseID:FBgn0029676 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_011985.1 Gene:TOM71 / 856517 SGDID:S000001159 Length:639 Species:Saccharomyces cerevisiae


Alignment Length:327 Identity:72/327 - (22%)
Similarity:114/327 - (34%) Gaps:78/327 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 SEDEKSLSDPESDVELDMEGVIEADSDPAQPMGNYSKKAT----------------EEEVEQASE 128
            :|||..|.|         :|.:.:.|:..:...|..|:..                |.::.|...
Yeast    62 NEDEADLKD---------DGSVVSGSNKRKKKKNKRKRNNKAKSGEGFDYPSLPNGEPDIAQLKG 117

  Fly   129 LRAQAASAYGQQ------------KFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKKPNACIR 181
            |......||..|            .|:|||..|..||||.|...:|::.....::........|.
Yeast   118 LSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIE 182

  Fly   182 DCDVALELNSDLAAGYKFRGRARRLLGDFELAAHDLR-QACKLDFDEETDEWLKEVTPNAKKIEQ 245
            ....|||:..|.:.....|..|...||:|..|..||. .:...|||..:.|.:.|...|      
Yeast   183 FTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLSVLSLNGDFDGASIEPMLERNLN------ 241

  Fly   246 HRLKQERRQAERKIKERQRDQRRARKEQEKHNASSGGSSGEFSGGNPGNGNMSDILGAM-SDPEV 309
                   :||.:.:.|               |.|.  ..|..|...|.|.:::...|.. |..||
Yeast   242 -------KQAMKVLNE---------------NLSK--DEGRGSQVLPSNTSLASFFGIFDSHLEV 282

  Fly   310 SAAIQDILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFGQAGEKAGKPSEPKPKKDSADFVDD 374
            |:    :.::....|.||   .:.:.::::....|.|  :..|.:...|.::......||:.|||
Yeast   283 SS----VNTSSNYDTAYA---LLSDALQRLYSATDEG--YLVANDLLTKSTDMYHSLLSANTVDD 338

  Fly   375 GL 376
            .|
Yeast   339 PL 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIP-RNP_001014719.2 Hip_N 10..47 CDD:271228
TPR_11 125..190 CDD:290150 20/76 (26%)
TPR_2 126..159 CDD:285020 14/44 (32%)
TPR repeat 126..154 CDD:276809 10/39 (26%)
TPR repeat 159..189 CDD:276809 4/29 (14%)
TPR repeat 194..222 CDD:276809 8/28 (29%)
STI1 299..336 CDD:128966 8/37 (22%)
TOM71NP_011985.1 3a0801s09 9..636 CDD:273380 72/327 (22%)
TPR repeat 127..155 CDD:276809 7/27 (26%)
TPR repeat 160..190 CDD:276809 4/29 (14%)
TPR repeat 195..218 CDD:276809 6/22 (27%)
TPR repeat 345..373 CDD:276809
TPR repeat 378..406 CDD:276809
TPR repeat 411..441 CDD:276809
TPR repeat 446..471 CDD:276809
TPR repeat 480..508 CDD:276809
TPR repeat 513..559 CDD:276809
TPR repeat 564..588 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345412
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.