DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIP-R and SGT1

DIOPT Version :10

Sequence 1:NP_726885.1 Gene:HIP-R / 31335 FlyBaseID:FBgn0029676 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_014700.1 Gene:SGT1 / 854222 SGDID:S000005583 Length:395 Species:Saccharomyces cerevisiae


Alignment Length:286 Identity:55/286 - (19%)
Similarity:89/286 - (31%) Gaps:95/286 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GDLKKL-----KYFI------DFALENPTFLNMPQLQFVKDFVEKFGGTVPPGQFNGGSAGGKCP 61
            ||..|:     :||:      |:.|....|.....|.:|.|       |:|..:..         
Yeast    82 GDRSKIGLVNFRYFVHFFNIKDYELAQSYFKKAKNLGYVDD-------TLPLWEDR--------- 130

  Fly    62 FGGVAGAKANEPANAPEDSEDEKSLSDPESDVELDMEGVIEADSDPAQPMGNYSKKATEEEVEQA 126
                ...|.|:.....:||.::.::...||   ::..|...:...|..|:          ::|.|
Yeast   131 ----LETKLNKKNKKQKDSTNKHTIKPVES---IENRGDNNSSHSPISPL----------KIETA 178

  Fly   127 SELRAQAASAYGQQKFDEAIALYT---------KAIELSPGN------ALFHAKRGQAF------ 170
            .:...:....:.|......|:|:|         ..|.:||.:      :....|.|..|      
Yeast   179 PQESPKFKIDWYQSSTSVTISLFTVNLPESKEQVNIYISPNDRRTLSISYQVPKSGSEFQYNAKL 243

  Fly   171 ----------LKL--KKPNACIRDCDVA---------LELNSDLAAGYKFRGRARRLLG------ 208
                      ||:  ||....:...|..         |..:|.|:...|....|.|||.      
Yeast   244 SHEVDPKAVSLKIFPKKLEITLSKIDSTQWKKLEEDILTESSRLSDEGKNSDSATRLLSAETASK 308

  Fly   209 ---DFELAAHDLRQACKLDFDEETDE 231
               .:..::.......|||.|||.||
Yeast   309 ERLSYPSSSKKKIDWSKLDIDEEADE 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIP-RNP_726885.1 Hip_N 10..47 CDD:271228 10/47 (21%)
TPR repeat 126..154 CDD:276809 5/36 (14%)
NlpI <139..269 CDD:443815 31/144 (22%)
TPR repeat 159..189 CDD:276809 9/62 (15%)
TPR repeat 194..222 CDD:276809 5/36 (14%)
STI1 299..336 CDD:128966
SGT1NP_014700.1 SGT1 10..395 CDD:227422 55/286 (19%)
TPR repeat 37..77 CDD:276809
TPR repeat 82..114 CDD:276809 8/31 (26%)
Blue background indicates that the domain is not in the aligned region.

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