DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIP-R and HIP1

DIOPT Version :9

Sequence 1:NP_001014719.2 Gene:HIP-R / 31335 FlyBaseID:FBgn0029676 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_567663.1 Gene:HIP1 / 828363 AraportID:AT4G22670 Length:441 Species:Arabidopsis thaliana


Alignment Length:449 Identity:141/449 - (31%)
Similarity:204/449 - (45%) Gaps:128/449 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MQTGDLKKLKYFIDFALENPTFLNMPQLQFVKDFVEKFGGTVPPGQFNGGSAGGKCPFGGVAGAK 69
            |.:..|.:||.|||....:|:.|..|.|.|.:|::|..|..:|.|.....              |
plant     1 MDSTKLSELKVFIDQCKSDPSLLTTPSLSFFRDYLESLGAKIPTGVHEED--------------K 51

  Fly    70 ANEPAN----------------APEDSEDEKSLSDPESDVELDMEGVIEADSDPAQPMGNYSKKA 118
            ..:|.:                .|:..|:|:.....||||||:.: .:|.|:||.|.||:.|.:.
plant    52 DTKPRSFVVEESDDDMDETEEVKPKVEEEEEEDEIVESDVELEGD-TVEPDNDPPQKMGDSSVEV 115

  Fly   119 TEEEVEQASELRAQAASAYGQQKFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKKPNACIRDC 183
            |:|..|.|.|.:.:|..|..:..|||||...|:||.|:|.:|:.:..|...::|||||||.|||.
plant   116 TDENREAAQEAKGKAMEALSEGNFDEAIEHLTRAITLNPTSAIMYGNRASVYIKLKKPNAAIRDA 180

  Fly   184 DVALELNSDLAAGYKFRGRARRLLGDFELAAHDLRQACKLDFDEETDEWLKEVTPNAKKIEQHRL 248
            :.|||:|.|.|.|||.||.||.:||::..||.||..|..:|:|||....||:|.|||.|:|:||.
plant   181 NAALEINPDSAKGYKSRGMARAMLGEWAEAAKDLHLASTIDYDEEISAVLKKVEPNAHKLEEHRR 245

  Fly   249 KQERRQAERKIKERQRDQRRARKE---------QEKHNASS------------------------ 280
            |.:|.:.||:.|:.:||:.|.|.|         :|:.::||                        
plant   246 KYDRLRKEREDKKAERDRLRRRAEAQAAYDKAKKEEQSSSSRPSGGGFPGGMPGGFPGGMPGGFP 310

  Fly   281 -----------------GGSSGEF-----------------------------------SGGNPG 293
                             ||..|.|                                   .||.||
plant   311 GGMGGMPGGFPGGMGGMGGMPGGFPGGMGGGMPAGMGGGMPGMGGGMPAGMGGGGMPGAGGGMPG 375

  Fly   294 NGNM------------SDILGAMSDPEVSAAIQDILSNPGNITKYASNPKIYNLIKKIV 340
            .|.|            .:::.|.|||||.||:||::.||.|:.|:.:|||:..:|.|::
plant   376 GGGMPGGMDFSKILNDPELMTAFSDPEVMAALQDVMKNPANLAKHQANPKVAPVIAKMM 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIP-RNP_001014719.2 Hip_N 10..47 CDD:271228 14/36 (39%)
TPR_11 125..190 CDD:290150 29/64 (45%)
TPR_2 126..159 CDD:285020 14/32 (44%)
TPR repeat 126..154 CDD:276809 11/27 (41%)
TPR repeat 159..189 CDD:276809 14/29 (48%)
TPR repeat 194..222 CDD:276809 15/27 (56%)
STI1 299..336 CDD:128966 17/36 (47%)
HIP1NP_567663.1 Hip_N 3..43 CDD:271228 14/39 (36%)
PLN03088 122..>224 CDD:215568 47/101 (47%)
TPR repeat 123..151 CDD:276809 11/27 (41%)
TPR repeat 156..186 CDD:276809 14/29 (48%)
TPR repeat 191..217 CDD:276809 14/25 (56%)
PRK00409 <231..>280 CDD:234750 19/48 (40%)
STI1 385..435 CDD:407696 19/50 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 87 1.000 Domainoid score I2745
eggNOG 1 0.900 - - E1_KOG1308
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2921
Inparanoid 1 1.050 200 1.000 Inparanoid score I1315
OMA 1 1.010 - - QHG53615
OrthoDB 1 1.010 - - D1282821at2759
OrthoFinder 1 1.000 - - FOG0003789
OrthoInspector 1 1.000 - - mtm999
orthoMCL 1 0.900 - - OOG6_104991
Panther 1 1.100 - - LDO PTHR45883
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3148
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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