DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIP-R and st13

DIOPT Version :9

Sequence 1:NP_001014719.2 Gene:HIP-R / 31335 FlyBaseID:FBgn0029676 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_956063.1 Gene:st13 / 564225 ZFINID:ZDB-GENE-030131-5395 Length:362 Species:Danio rerio


Alignment Length:360 Identity:151/360 - (41%)
Similarity:211/360 - (58%) Gaps:32/360 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MQTGDLKKLKYFIDFALENPTFLNMPQLQFVKDFVEKFGGTVP-PGQFNGGSAGGKCPFGGVAGA 68
            |....:.:||.|:....|||:.|::|::.|.|.::...|.::| |...:..|..|.||..|.|..
Zfish     1 MDPRKVTELKAFVQLCNENPSVLHLPEMSFFKTWLLGMGASIPSPTMNDSSSCKGSCPCDGGAKK 65

  Fly    69 KANEPANAPEDSEDEKSLSDPESDVELDMEGVIEADSDPAQPMGNYSK-KATEEEVEQASELRAQ 132
            .|.:|..|| .||.|      ||::|:|.|||||.|:|..|.||::.. :.|||.::||:|.:.:
Zfish    66 AAPKPEPAP-PSESE------ESEIEIDNEGVIEPDTDDPQEMGDFENLEVTEEMMDQANEKKTE 123

  Fly   133 AASAYGQQKFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKKPNACIRDCDVALELNSDLAAGY 197
            |..|.|.....:|:.|:|:||:|:|..|:.:|||...::|::||||.|||||.|:.:|.|.|..|
Zfish   124 AIDALGDGDLQKALDLFTEAIKLNPKLAILYAKRASVYVKMQKPNAAIRDCDRAISINPDSAQPY 188

  Fly   198 KFRGRARRLLGDFELAAHDLRQACKLDFDEETDEWLKEVTPNAKKIEQHRLKQERRQAERKIKER 262
            |:||:|.:|||.:|.:|.||..|||||:|||....||||.|.|.||..||.|.||::.||:|:.|
Zfish   189 KWRGKAHKLLGHWEESARDLAMACKLDYDEEASAMLKEVQPKANKIIDHRRKYERKREEREIRAR 253

  Fly   263 Q-------RDQRRARKEQEKHNASSGGSSGE-------------FSGGNPGNGNM---SDILGAM 304
            |       .:..||::|:|....:.||..|.             |.||.||..|:   .::|.||
Zfish   254 QERVKKAREEHERAQREEEARQQAGGGGGGAGAGGFPGFPGGAGFPGGMPGFNNLFNDPEVLMAM 318

  Fly   305 SDPEVSAAIQDILSNPGNITKYASNPKIYNLIKKI 339
            .||||.||.||:..||.||.||.|||||..||.|:
Zfish   319 QDPEVMAAFQDVAQNPANIAKYQSNPKIMALINKL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIP-RNP_001014719.2 Hip_N 10..47 CDD:271228 11/36 (31%)
TPR_11 125..190 CDD:290150 28/64 (44%)
TPR_2 126..159 CDD:285020 12/32 (38%)
TPR repeat 126..154 CDD:276809 9/27 (33%)
TPR repeat 159..189 CDD:276809 15/29 (52%)
TPR repeat 194..222 CDD:276809 14/27 (52%)
STI1 299..336 CDD:128966 22/36 (61%)
st13NP_956063.1 TPR repeat 185..213 CDD:276809 14/27 (52%)
STI1 311..350 CDD:128966 22/38 (58%)
Hip_N 3..43 CDD:271228 11/39 (28%)
TPR_11 116..182 CDD:290150 28/65 (43%)
TPR repeat 117..145 CDD:276809 9/27 (33%)
TPR repeat 150..180 CDD:276809 15/29 (52%)
TPR_11 151..215 CDD:290150 33/63 (52%)
TPR_1 151..183 CDD:278916 16/31 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596552
Domainoid 1 1.000 97 1.000 Domainoid score I7197
eggNOG 1 0.900 - - E1_KOG1308
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2921
Inparanoid 1 1.050 265 1.000 Inparanoid score I3044
OMA 1 1.010 - - QHG53615
OrthoDB 1 1.010 - - D1282821at2759
OrthoFinder 1 1.000 - - FOG0003789
OrthoInspector 1 1.000 - - otm26410
orthoMCL 1 0.900 - - OOG6_104991
Panther 1 1.100 - - LDO PTHR45883
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3214
SonicParanoid 1 1.000 - - X3148
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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