DRSC/TRiP Functional Genomics Resources

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Protein Alignment HIP-R and hip-1

DIOPT Version :9

Sequence 1:NP_001014719.2 Gene:HIP-R / 31335 FlyBaseID:FBgn0029676 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_499811.1 Gene:hip-1 / 176794 WormBaseID:WBGene00011735 Length:422 Species:Caenorhabditis elegans


Alignment Length:395 Identity:152/395 - (38%)
Similarity:206/395 - (52%) Gaps:64/395 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LKYFIDFALENPTFLNMPQLQFVKDFVEKFGGTVPPGQFNGGSAGGKCPFGGVAGAKANEPANAP 77
            ||.|:.....||..|:.|:..|.||::...|.|:||..  .....||||.       :.||....
 Worm     7 LKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLPPKP--ADKPEGKCPM-------SEEPKKET 62

  Fly    78 EDSEDEKSLSDPESDV---------ELDMEGVIEADSDPAQPMGNYSKKATEEEVEQASELRAQA 133
            ..:|     :.||.::         ::|.|||||.:...|.|||:.:|:|||:|:|:|||.|.:|
 Worm    63 PAAE-----ATPEPEIPKPEEIPFPKIDNEGVIEPEEAVALPMGDSAKEATEDEIEKASEERGKA 122

  Fly   134 ASAYGQQKFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKKPNACIRDCDVALELNSDLAAGYK 198
            ..|:....||.|:..:|.|||.:||:|:.||||....||||:|.|.|.|||.|:.:|.|.|.|||
 Worm   123 QEAFSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLKLKRPVAAIADCDKAISINPDSAQGYK 187

  Fly   199 FRGRARRLLGDFELAAHDLRQACKLDFDEETDEWLKEVTPNAKKIEQHRLKQERRQAERKIKERQ 263
            |||||.||||.:..|..||..|||||:||..:||||||.|||.||:::....||::|:.::.||:
 Worm   188 FRGRANRLLGKWVEAKTDLATACKLDYDEAANEWLKEVEPNAHKIQEYNRAVERQKADIELAERR 252

  Fly   264 RDQRRAR-------KEQEKHNAS-------SGGSSGEFSGGNPGNGNM----------------- 297
            ...|||:       :|:.|..|.       .||..|...||.||.|.|                 
 Worm   253 ERVRRAQEANKKAAEEEAKRQAEQGDDFDFEGGFPGGMPGGFPGAGGMPGGFPGAPGGGAPGGMG 317

  Fly   298 ---------SDILGAMSDPEVSAAIQDILSNPGNITKYASNPKIYNLIKKI-VPGGDVGAAFGQA 352
                     .:|..|:.||||..|:.||:.||.|:.||.:|||:..||.|: ..|..:...||.|
 Worm   318 AGIEQLFSDPEIAAAIQDPEVLPALMDIMQNPANMMKYINNPKVAKLISKLQSKGAGMPGMFGGA 382

  Fly   353 GEKAG 357
            ...||
 Worm   383 PPSAG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HIP-RNP_001014719.2 Hip_N 10..47 CDD:271228 12/33 (36%)
TPR_11 125..190 CDD:290150 31/64 (48%)
TPR_2 126..159 CDD:285020 14/32 (44%)
TPR repeat 126..154 CDD:276809 11/27 (41%)
TPR repeat 159..189 CDD:276809 16/29 (55%)
TPR repeat 194..222 CDD:276809 17/27 (63%)
STI1 299..336 CDD:128966 17/36 (47%)
hip-1NP_499811.1 HipN 2..41 CDD:375680 12/33 (36%)
PLN03088 115..>226 CDD:215568 61/110 (55%)
TPR repeat 148..178 CDD:276809 16/29 (55%)
TPR repeat 183..211 CDD:276809 17/27 (63%)
STI1 320..368 CDD:375364 19/47 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 95 1.000 Domainoid score I4649
eggNOG 1 0.900 - - E1_KOG1308
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2921
Inparanoid 1 1.050 249 1.000 Inparanoid score I2012
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53615
OrthoDB 1 1.010 - - D1282821at2759
OrthoFinder 1 1.000 - - FOG0003789
OrthoInspector 1 1.000 - - otm14757
orthoMCL 1 0.900 - - OOG6_104991
Panther 1 1.100 - - LDO PTHR45883
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3214
SonicParanoid 1 1.000 - - X3148
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.910

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