DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rala and Rap2c

DIOPT Version :10

Sequence 1:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_766001.1 Gene:Rap2c / 72065 MGIID:1919315 Length:183 Species:Mus musculus


Alignment Length:188 Identity:80/188 - (42%)
Similarity:127/188 - (67%) Gaps:13/188 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 76
            :||:::|||||||||||:||:...|:|.|:||..|.|||::.:|.....::||||||.|.:|::|
Mouse     4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMR 68

  Fly    77 DNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQL 141
            |.|.::|:||:.|:|:.:.:|||..:..|:||:|||..|.:|.:|||||.||..:|:|..||.:.
Mouse    69 DLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLEPEREVMSSEGRA 133

  Fly   142 RAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKTEDSKATSGRAKDRCKKRRLKCT 199
            .||:|..|::|||||::..||::|.:::|::......:.       :|:|      ||
Mouse   134 LAQEWGCPFMETSAKSKSMVDELFAEIVRQMNYSSLPEK-------QDQC------CT 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 76/161 (47%)
Rap2cNP_766001.1 Rap2 3..165 CDD:133376 76/160 (48%)
Effector region. /evidence=ECO:0000305 32..40 4/7 (57%)

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