DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rala and rasd2a

DIOPT Version :10

Sequence 1:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001025373.2 Gene:rasd2a / 565976 ZFINID:ZDB-GENE-050913-57 Length:341 Species:Danio rerio


Alignment Length:173 Identity:59/173 - (34%)
Similarity:96/173 - (55%) Gaps:12/173 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKKPTAGPALHKVIMVGSGGVGKSALTLQFMYDE-FVEDYEPTKADSYRKKVVLDGEEVQIDIL 64
            :|.||:   ...:|:::|:..|||:||..:|:.:| |.|.||||..|.:.|...:.||..|:|||
Zfish    93 VSVKPS---HYRRVVVLGAPRVGKTALIRRFLGEEVFEEHYEPTSEDFHSKLYHIRGERYQLDIL 154

  Fly    65 DTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQIL-------RVKNDESIPFLLV 122
            |.:.:.|:.|.|.....:|:.||.|||:||.:||......||:|.       :.|.:..:|.::.
Zfish   155 DASKERDFPAKRRLTILTGDIFLLVFSVTDRDSFTEVCSLREEIFTAKSKLTKSKENRQLPIIIC 219

  Fly   123 GNKCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVF 165
            .||.|::..|.|..|:......:.:|.: |.||||..|::::|
Zfish   220 ANKADVDSPRAVQRSDVAQCLGEDSVLF-EVSAKTCTNLEEMF 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 56/162 (35%)
rasd2aNP_001025373.2 None

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