DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rala and rap2b

DIOPT Version :10

Sequence 1:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001001729.1 Gene:rap2b / 414329 ZFINID:ZDB-GENE-040426-2818 Length:182 Species:Danio rerio


Alignment Length:190 Identity:78/190 - (41%)
Similarity:129/190 - (67%) Gaps:11/190 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 76
            :||:::|||||||||||:||:...|:|.|:||..|.|||::.:|.....::||||||.|.:|::|
Zfish     4 YKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMR 68

  Fly    77 DNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQL 141
            |.|.::|:||:.|:|:.:.:|||..:..|:||:|||..|.:|.:|||||.||..:|:|...|.:.
Zfish    69 DLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSSGEGKA 133

  Fly   142 RAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKTEDSKATSGRAKDRCKKRRLKCTLL 201
            .|.:|:.|::|||||.:.:||::|.:::|::       :.|::....::|    ..|.:|
Zfish   134 LADEWSCPFMETSAKNKGSVDELFAEIVRQM-------NYASAPNGDEQC----CSCAIL 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 74/161 (46%)
rap2bNP_001001729.1 Rap2 3..165 CDD:133376 74/167 (44%)

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