DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rala and Rem1

DIOPT Version :10

Sequence 1:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001020924.1 Gene:Rem1 / 366232 RGDID:1306560 Length:297 Species:Rattus norvegicus


Alignment Length:212 Identity:58/212 - (27%)
Similarity:109/212 - (51%) Gaps:25/212 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDT--AGQEDY 72
            ||::|:::|..||||::|...|. ::...|........|.:.:.:|||:..:.::||  |.:.|.
  Rat    79 ALYRVVLLGDPGVGKTSLASLFA-EKQERDLHEQLGGVYERTLSVDGEDTTLVVMDTWEAEKLDE 142

  Fly    73 AAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLS 137
            :..:::..::|..::.|:||.|..||::..|.|.|:.|......:|.:|||||.||...|:|.:.
  Rat   143 SWSQESCLQAGSAYVIVYSIADRSSFESASELRIQLRRTHQAAHVPIILVGNKADLARCREVSVE 207

  Fly   138 ECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKTED----------------------S 180
            |.:..|..:...::||||..:.||.::|..::|::|.|:.::                      :
  Rat   208 EGRACAVVFDCKFIETSATLQHNVTELFEGVVRQLRLRRQDNAAPETPSPRRRASLGQRARRFLA 272

  Fly   181 KATSGRAKDRCKKRRLK 197
            :.|:..|:.|..|.|.|
  Rat   273 RLTARSARRRALKARSK 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 48/163 (29%)
Rem1NP_001020924.1 RGK 81..297 CDD:206715 56/210 (27%)

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