DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rala and Rasl10b

DIOPT Version :10

Sequence 1:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_006247090.1 Gene:Rasl10b / 303382 RGDID:1310873 Length:235 Species:Rattus norvegicus


Alignment Length:245 Identity:67/245 - (27%)
Similarity:102/245 - (41%) Gaps:69/245 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADS-YRKKVVLDGEEVQIDILD---------- 65
            ::|.::|:.||||||:..||:|:||.|...||.|.. |...||::|....:.|||          
  Rat     5 YRVAVLGARGVGKSAIVRQFLYNEFSEVCVPTTARRLYLPAVVMNGHVHDLQILDFPPISAFPVN 69

  Fly    66 --TAGQED----------------------------YAAIRDNYFRSGEGFLCVFSITDDESFQA 100
              ..||:|                            :|.......||...::.|:.|...:||:.
  Rat    70 TLQKGQQDRLRPEKECSQQLWRPQPDLLPKGLSSQEWADACCRGLRSVHAYILVYDICCFDSFEY 134

  Fly   101 TQEFREQIL--RVKNDESIPFLLVGNKCDLNDKRKVP-LSECQLRAQQWAVPYVETSAKTRENVD 162
            .:..|:|||  ||......|.::||||.||...|.:| .:...|..:.|...|||.|||...::.
  Rat   135 VKTIRQQILETRVIGTSETPIIIVGNKRDLQRGRVIPRWNVSHLVRKTWKCGYVECSAKYNWHIL 199

  Fly   163 KVFFDLMREIRSRKTEDSKATSGRAKDRCKK-----------RRLKCTLL 201
            .:|.:|::.:            |.|  |||.           ||.:|.::
  Rat   200 LLFSELLKSV------------GCA--RCKHVHAALRFQGALRRNRCAIM 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 59/205 (29%)
Rasl10bXP_006247090.1 P-loop containing Nucleoside Triphosphate Hydrolases 5..235 CDD:476819 67/243 (28%)

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