DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rala and Rap1a

DIOPT Version :10

Sequence 1:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001005765.1 Gene:Rap1a / 295347 RGDID:1359694 Length:184 Species:Rattus norvegicus


Alignment Length:191 Identity:91/191 - (47%)
Similarity:133/191 - (69%) Gaps:11/191 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 76
            :|::::|||||||||||:||:...|||.|:||..|||||:|.:|.::..::||||||.|.:.|:|
  Rat     4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMR 68

  Fly    77 DNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQL 141
            |.|.::|:||..|:|||...:|...|:.||||||||:.|.:|.:||||||||.|:|.|...:.|.
  Rat    69 DLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQN 133

  Fly   142 RAQQWA-VPYVETSAKTRENVDKVFFDLMREIRSRKTEDSKATSGRAKDRCKKRRLKCTLL 201
            .|:||. ..::|:|||::.||:::|:||:|:| :|||...|.         |.::..|.||
  Rat   134 LARQWCNCAFLESSAKSKINVNEIFYDLVRQI-NRKTPVEKK---------KPKKKSCLLL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 83/162 (51%)
Rap1aNP_001005765.1 Rap1 3..167 CDD:133375 83/163 (51%)
Effector region. /evidence=ECO:0000305 32..40 4/7 (57%)

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