DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rala and Rasl10b

DIOPT Version :10

Sequence 1:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001013404.1 Gene:Rasl10b / 276952 MGIID:2685575 Length:203 Species:Mus musculus


Alignment Length:213 Identity:63/213 - (29%)
Similarity:99/213 - (46%) Gaps:37/213 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADS-YRKKVVLDGEEVQIDILD--------TA 67
            ::|.::|:.||||||:..||:|:||.|...||.... |...||::|....:.|||        ..
Mouse     5 YRVAVLGARGVGKSAIVRQFLYNEFSEVCVPTTTRRLYLPAVVMNGHVHDLQILDFPPISAFPVN 69

  Fly    68 GQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQIL--RVKNDESIPFLLVGNKCDLND 130
            ..:::|.......||...::.|:.|...:||:..:..|:|||  ||......|.::||||.||..
Mouse    70 TLQEWADACCRGLRSVHAYILVYDICCFDSFEYVKTIRQQILETRVIGTSETPIIIVGNKRDLQR 134

  Fly   131 KRKVP-LSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKTEDSKATSGRAKDRCKK- 193
            .|.:| .:...|..:.|...|||.|||...::..:|.:|::.:            |.|  |||. 
Mouse   135 GRVIPRWNVSHLVRKTWKCGYVECSAKYNWHILLLFSELLKSV------------GCA--RCKHV 185

  Fly   194 ----------RRLKCTLL 201
                      ||.:|.::
Mouse   186 HAALRFQGALRRNRCAIM 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 55/173 (32%)
Rasl10bNP_001013404.1 Small GTPase-like 1..203 63/211 (30%)
RRP22 5..203 CDD:133342 63/211 (30%)
Effector region 33..42 2/8 (25%)

Return to query results.
Submit another query.