DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rala and ras1

DIOPT Version :9

Sequence 1:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_593579.1 Gene:ras1 / 2542285 PomBaseID:SPAC17H9.09c Length:219 Species:Schizosaccharomyces pombe


Alignment Length:170 Identity:85/170 - (50%)
Similarity:118/170 - (69%) Gaps:0/170 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 76
            :|:::||.|||||||||:|.:...||::|:||..||||||..:|||...:|:|||||||:|:|:|
pombe     9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEYSAMR 73

  Fly    77 DNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQL 141
            :.|.|:|||||.|::||...||.....|.:||||||:.::.|.:||.|||||..:|.|..:|.:.
pombe    74 EQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQ 138

  Fly   142 RAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKTEDSK 181
            .|:.....|||||||.|.||::.|:.|:|.||.....:.|
pombe   139 LAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYNKSEEK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 83/161 (52%)
ras1NP_593579.1 small_GTPase 7..172 CDD:197466 84/162 (52%)
H_N_K_Ras_like 8..170 CDD:133338 82/160 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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