DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rala and Rap1b

DIOPT Version :10

Sequence 1:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_077777.1 Gene:Rap1b / 215449 MGIID:894315 Length:184 Species:Mus musculus


Alignment Length:191 Identity:90/191 - (47%)
Similarity:135/191 - (70%) Gaps:11/191 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 76
            :|::::|||||||||||:||:...|||.|:||..|||||:|.:|.::..::||||||.|.:.|:|
Mouse     4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMR 68

  Fly    77 DNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQL 141
            |.|.::|:||..|:|||...:|...|:.||||||||:.:.:|.:||||||||.|:|.|...:.|.
Mouse    69 DLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQN 133

  Fly   142 RAQQW-AVPYVETSAKTRENVDKVFFDLMREIRSRKTEDSKATSGRAKDRCKKRRLKCTLL 201
            .|:|| ...::|:|||::.||:::|:||:|:| :|||    ...|:|     :::..|.||
Mouse   134 LARQWNNCAFLESSAKSKINVNEIFYDLVRQI-NRKT----PVPGKA-----RKKSSCQLL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 82/162 (51%)
Rap1bNP_077777.1 Rap1 3..167 CDD:133375 82/163 (50%)
Interaction with KRIT1. /evidence=ECO:0000250|UniProtKB:P61224 25..67 20/41 (49%)
Effector region. /evidence=ECO:0000305 32..40 4/7 (57%)

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