DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rala and krasl

DIOPT Version :9

Sequence 1:NP_525063.1 Gene:Rala / 31332 FlyBaseID:FBgn0015286 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_004920180.1 Gene:krasl / 100485959 XenbaseID:XB-GENE-22063560 Length:226 Species:Xenopus tropicalis


Alignment Length:227 Identity:99/227 - (43%)
Similarity:141/227 - (62%) Gaps:41/227 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIR 76
            :|:::||:|||||||||:|.:.:.||::|:||..|||||:||:|||...:|||||||||:|:|:|
 Frog     4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMR 68

  Fly    77 DNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQL 141
            |.|.|:||||||||:|.:.:||:....:||||.|||:.|.:|.:|||||||| ..|.|...:.|.
 Frog    69 DQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRTVDTKQAQD 132

  Fly   142 RAQQWAVPYVETSAKTRENVDKVFFDLMREIRS-------------------------------- 174
            .|:.:.:|::|||||||:.|:..|:.|:||||.                                
 Frog   133 LARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKMSKEEKTPGCVKVKKCRVMGVDDAFYT 197

  Fly   175 -----RKTEDSKATSGRAKDRCKKRRLKCTLL 201
                 ||.::..:..|:.|   ||.:.||.:|
 Frog   198 LVREIRKHKEKMSKDGKKK---KKSKTKCIIL 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RalaNP_525063.1 RalA_RalB 12..174 CDD:206710 89/161 (55%)
kraslXP_004920180.1 H_N_K_Ras_like 3..164 CDD:133338 88/160 (55%)
RAS 16..166 CDD:214541 83/150 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1259506at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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