DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rala and ralb

DIOPT Version :9

Sequence 1:	NP_525063.1	Gene:	Rala / 31332	FlyBaseID:	FBgn0015286	Length:	201	Species:	Drosophila melanogaster
Sequence 2:	NP_001096315.1	Gene:	ralb / 100124895	XenbaseID:	XB-GENE-494548	Length:	206	Species:	Xenopus tropicalis

Alignment Length:	193	Identity:	146/193 - (75%)
Similarity:	165/193 - (85%)	Gaps:	2/193 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly    11 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAI 75
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Frog    14 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAI 78

  Fly    76 RDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDE-SIPFLLVGNKCDLNDKRKVPLSEC 139
            ||||||||||||.|||||:.|||.||.||||||||||.:| .||.||||||.||.::|:||:.|.
Frog    79 RDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLLVGNKSDLEERRQVPMDEA 143

  Fly   140 QLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKTEDSKATSGRAKDRCKKR-RLKCTLL 201
            :.:|::|.|.|||||||||.||||||||||||:||:|..::|..:|:...:.||. :.:|.||
Frog   144 RGKAEEWGVQYVETSAKTRANVDKVFFDLMREVRSKKMSENKDKNGKKSGKSKKGFKQRCCLL 206

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rala	NP_525063.1	RalA_RalB	12..174	CDD:206710	135/162 (83%)
ralb	NP_001096315.1	RalA_RalB	15..178	CDD:206710	135/162 (83%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	302	1.000	Inparanoid score	I2626
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002545
OrthoInspector	1	1.000	-	-		otm48220
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1669
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	5.050