DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mnt and Mxd3

DIOPT Version :9

Sequence 1:NP_001162651.1 Gene:Mnt / 31331 FlyBaseID:FBgn0023215 Length:790 Species:Drosophila melanogaster
Sequence 2:NP_665716.2 Gene:Mxd3 / 252915 RGDID:628624 Length:206 Species:Rattus norvegicus


Alignment Length:111 Identity:42/111 - (37%)
Similarity:64/111 - (57%) Gaps:7/111 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   430 SQLSAHHHTGHGGRRRTTSSNSNGA--GTREVHNKLEKERRAQLKECYDLLKKVLPMGDEDRKKT 492
            :.|..||..|...|||.....:.||  ..|.|||:|||.||||||.|.:.|::.:|:| .|..:.
  Rat    30 ASLCPHHSPGTVCRRRKAPLQAPGALNSGRHVHNELEKRRRAQLKRCLEQLRQQMPLG-VDHTRY 93

  Fly   493 SNLTILDTAHKYVNSLSHEVCEQEAK--IEKLAKQKIELQKRLKQL 536
            :.|::|..|..::..|..:  ||:|:  .|||..::..||::|:||
  Rat    94 TTLSLLRRARMHIQKLEEQ--EQQAQRLKEKLRSRQQSLQQQLEQL 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MntNP_001162651.1 HLH 457..512 CDD:238036 22/54 (41%)
Mxd3NP_665716.2 Interaction with SIN3A and SIN3B. /evidence=ECO:0000250 8..25
bHLH_SF 53..122 CDD:412148 27/71 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2483
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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