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Protein Alignment Parg and Parg

DIOPT Version :9

Sequence 1:	NP_001245511.1	Gene:	Parg / 31329	FlyBaseID:	FBgn0023216	Length:	723	Species:	Drosophila melanogaster
Sequence 2:	NP_112629.2	Gene:	Parg / 83507	RGDID:	620387	Length:	972	Species:	Rattus norvegicus

Alignment Length:	575	Identity:	242/575 - (42%)
Similarity:	334/575 - (58%)	Gaps:	41/575 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 KSPDGGISEIETEEE----------PENLANSLDDSWRGVSMEAIHRNRQPFELENLPPVTAGNL 57
            ||.|....:.|...:          |.||..  |..|.|..:|.:  .:.|.....||.:.....
  Rat   415 KSEDKRKEQCEVRHQRAERKIPKYVPPNLPP--DKKWLGTPIEEM--RKMPRCGVRLPLLRPSAS 475

  Fly    58 HRVMYQLPIRET--PPRPYKSPGK--WDSEHVRLPCAPESKYPRENPDGSTTIDFRWEMIERALL 118
            |.|..::.:...  .|:|:.:..|  ||::||::||:.::.||.|:.:|..|...|||:|:.|||
  Rat   476 HTVTVRVDLLRAGEVPKPFPTHYKDLWDNKHVKMPCSEQNLYPVEDENGERTAGSRWELIQTALL 540

  Fly   119 QPIKTCEELQAAIISYNTTYRDQWHFRALHQLLDEELDESETRVFFEDLLPRIIRLALRLPDLIQ 183
            ......:.|:.||:.||..|..:|.|.||....|:.|:|:|.:..::.:||.::::||.||::..
  Rat   541 NKFTRPQNLKDAILKYNVAYSKKWDFTALVDFWDKVLEEAEAQHLYQSILPDMVKIALCLPNICT 605

  Fly   184 SPVPLLKHHKNASLSLSQQQISCLLANAFLCTFPRRNTLKRKSEYSTFPDINFNRLYQSTGPAVL 248
            .|:||||...|.|:::||:||:.||||||.|||||||. |.|||||::||||||||::.......
  Rat   606 QPIPLLKQKMNHSVTMSQEQIASLLANAFFCTFPRRNA-KMKSEYSSYPDINFNRLFEGRSSRKP 669

  Fly   249 EKLKCIMHYFRRVCPTERDASNVPTGVVTFVRRSGLPEHLIDWSQSAAPLGDVPLHVDAEGTIED 313
            ||||.:..|||||  ||:.    |||:|||.|:|  .|...:|.:...||  ..|||..|||||.
  Rat   670 EKLKTLFCYFRRV--TEKK----PTGLVTFTRQS--LEDFPEWERCDKPL--TRLHVTYEGTIEG 724

  Fly   314 EGIGLLQVDFANKYLGGGVLGHGCVQEEIRFVICPELLVGKLFTECLRPFEALVMLGAERYSNYT 378
            .|.|:|||||||:::||||.|.|.|||||||:|.|||:|.:||||.|...|.|::.|.|:||.||
  Rat   725 NGRGMLQVDFANRFVGGGVTGAGLVQEEIRFLINPELIVSRLFTEVLDHNECLIITGTEQYSEYT 789

  Fly   379 GYAGSFEWSGNFEDSTPRDSSGRRQTAIVAIDALHFAQSHHQYREDLMERELNKAYIGFVHWMVT 443
            |||.::.|:.:.||.:.:|...||.|.|||||||||.:...|:..:.:.|||||||.||:...|.
  Rat   790 GYAETYRWARSHEDGSEKDDWQRRCTEIVAIDALHFRRYLDQFVPEKVRRELNKAYCGFLRPGVP 854

  Fly   444 PP--PGVATGNWGCGAFGGDSYLKALLQLMVCAQLGRPLAYYTFGNVEFRDDFHEMWLLFRNDGT 506
            |.  ..||||||||||||||:.||||:||:..|...|.:.|:|||:.|...|.:.|.........
  Rat   855 PENLSAVATGNWGCGAFGGDARLKALIQLLAAAAAERDVVYFTFGDSELMRDIYSMHTFLTERKL 919

  Fly   507 TVQQLWS-ILRSYSRLIKEKSSKEPRENKASKKKLYDFI---KEELKKVRDVPGE 557
            .|.:::. :||.|....::.||..|      ..|||.||   .|...:..|.||:
  Rat   920 NVGKVYRLLLRYYREECRDCSSPGP------DTKLYPFIYHAAESSAETSDQPGQ 968

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.