DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Parg and pargl

DIOPT Version :9

Sequence 1:NP_001245511.1 Gene:Parg / 31329 FlyBaseID:FBgn0023216 Length:723 Species:Drosophila melanogaster
Sequence 2:XP_001338257.2 Gene:pargl / 797792 ZFINID:ZDB-GENE-090313-286 Length:609 Species:Danio rerio


Alignment Length:597 Identity:225/597 - (37%)
Similarity:318/597 - (53%) Gaps:84/597 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKSPDGGISEIETEEEPENLAN--------------SLDDSWRGVSMEAIH------------- 38
            |...|....:|.:.:..|.:..|              |...|..|..|:..|             
Zfish    41 MGNKPAASAAETDQKHPPASAENAERSGRRDRDTANSSSQSSSEGDLMQTSHTSGSQSRATLPTF 105

  Fly    39 --RNRQPFELENL---PPVTAGNLHRVMYQLP-IRETPPRPYKSPGKWDSEHVRLPCAPESKYPR 97
              ||.|  .|||.   .|......|.|:..|. :::....|.:....||:.||:||       ..
Zfish   106 PIRNLQ--RLENYTMNSPTLLWKGHTVLVDLDWVKQGVIAPRQGQHVWDAHHVKLP-------HM 161

  Fly    98 ENPDGSTTIDFRWEMIERAL--LQPIKTCEELQAAIISYNTTYRDQWHFRA-------LHQLLDE 153
            ::|..|.:...|||.|::||  |.|..:..::|.||:|||::.||:|.|.|       ||: :|:
Zfish   162 QSPHASRSGQPRWEAIKQALRKLTPSSSIGDIQTAIMSYNSSNRDKWTFDALFYYGKNLHK-MDD 225

  Fly   154 ELDESETRVFFEDLLPRIIRLALRLPDLIQSPVPLLKHHKNASLSLSQQQISCLLANAFLCTFPR 218
            .|         ..::|::.:||..||.|||..:|||:|::|.:::||||||||||||||.||||.
Zfish   226 NL---------HLVIPKMAKLATELPSLIQRSIPLLRHNQNQAITLSQQQISCLLANAFFCTFPH 281

  Fly   219 RNTLKRKSEYSTFPDINFNRLY-------QSTGPAVLEKLKCIMHYFRRVCPTERDASNVPTGVV 276
            ||.....|||:::|.|||:.|:       :.:|.|  |||:.|.|||..|...|:|.:....|:|
Zfish   282 RNDTSPGSEYASYPTINFSSLFGGRNDPSKLSGKA--EKLRAIFHYFDTVTSEEKDPACKADGLV 344

  Fly   277 TFVRRSGLPEHLIDWSQSAAPLGDVPLHVDAEGTIEDEGIGLLQVDFANKYLGGGVLGHGCVQEE 341
            ||.|.|.....|..|......|.:  |||.|:|:||.||.|:||||||:|::|||||..|.||||
Zfish   345 TFERVSVPASELPKWKSEKKLLKN--LHVSADGSIEKEGTGMLQVDFASKFIGGGVLKSGLVQEE 407

  Fly   342 IRFVICPELLVGKLFTECLRPFEALVMLGAERYSNYTGYAGSFEWSGNFEDSTPRDSSGRRQTAI 406
            |.|::.|||::.:||||.|...|.:.:.|.:.||..:||:.||.|:|.:.|.|.||...||...|
Zfish   408 ILFLMSPELILARLFTEKLDDHECVRITGPQMYSLTSGYSRSFSWTGPYMDRTKRDVWKRRFRQI 472

  Fly   407 VAIDALHFAQSHHQYREDLMERELNKAYIGFVHWMVTPPPGVATGNWGCGAFGGDSYLKALLQLM 471
            ||||||.|.....||..:.:.||||||::||..   .|...:||||||||||.||..||||||||
Zfish   473 VAIDALDFKNPLEQYSRENITRELNKAFVGFCG---QPKTAIATGNWGCGAFRGDPKLKALLQLM 534

  Fly   472 VCAQLGRPLAYYTFGNVEFRDDFHEMWLLFRNDGTTVQQLWSILRSYSRLIKEKSSKEPRENKAS 536
            ..|.:.|.:||:||||....::..:|..:......||.:|:.:|:.|.:  ..:.::.|.:    
Zfish   535 AAAVVDRDVAYFTFGNTHLANELQKMHDILTQRKVTVGKLYELLKDYCK--HYERTRTPTD---- 593

  Fly   537 KKKLYDFIKEEL 548
               ||.||::.:
Zfish   594 ---LYRFIRDNI 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PargNP_001245511.1 PARG_cat 155..492 CDD:282834 163/343 (48%)
parglXP_001338257.2 PARG_cat 230..555 CDD:282834 162/331 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583642
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48165
OrthoDB 1 1.010 - - D353452at33208
OrthoFinder 1 1.000 - - FOG0004062
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102366
Panther 1 1.100 - - O PTHR12837
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2814
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.860

Return to query results.
Submit another query.