DRSC/TRiP Functional Genomics Resources

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Protein Alignment Parg and ncoa4

DIOPT Version :10

Sequence 1:NP_477321.2 Gene:Parg / 31329 FlyBaseID:FBgn0023216 Length:723 Species:Drosophila melanogaster
Sequence 2:XP_002940491.3 Gene:ncoa4 / 100497661 XenbaseID:XB-GENE-1008638 Length:634 Species:Xenopus tropicalis


Alignment Length:313 Identity:66/313 - (21%)
Similarity:102/313 - (32%) Gaps:77/313 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 EDLMERELNKAYIGFVHWMVTP-----PPGVATGNWGC--GAFGGDSYLKALLQLM-----VCAQ 475
            :||.:.:|:       .|:::|     |..||. .|..  .||..|..:...||.:     .|..
 Frog   331 QDLEDMDLS-------DWLISPTVTEDPTDVAE-KWRAVFKAFDEDYKISDWLQKVEACGNCCGG 387

  Fly   476 LGRPLAYYTFGNVEFRDD----------FHEMWLLFRNDGTTVQQLWSILRSYSRLIKEKSSKEP 530
            ....|.....||::..::          .::||||..:......|.............|....|.
 Frog   388 QTSSLEIENLGNLKCLNEQIGGKKNVSSSNDMWLLQSSQPVFKPQDVCKANEQCSTFAECVCDES 452

  Fly   531 RENKASKKKLYDFIKEELKKVRDVPGEGASAEAGSSRVAGLGEGKSETSAKSSPEL-NKQP--AR 592
            .|.:|.:|.|:   |::                        |:.|:....|....| |::|  |:
 Frog   453 CEKEALRKWLW---KKD------------------------GKDKNGVLQKQGQHLKNREPEKAK 490

  Fly   593 PQITITQQSTDLLPAQLSQDNSNSSEDQALLMLSDDEEANAMMEAASLEAKSSVEISNSS-TTSK 656
            |.|::...........||........|.:|..|.:           .||...|..|:.|| |..|
 Frog   491 PSISMWLHPCRRDAESLSSTQKTEESDPSLRHLMN-----------LLETPLSKWIAKSSQTEEK 544

  Fly   657 TSSTATKSMGSGGRQLSLLEMLDTHYEKGSASKRPRKSPNCSKAEGSAKSRKE 709
            .|...|:|..|     .|.|.|...:...:|:.....|.|..|.|...:|..|
 Frog   545 ASKENTQSKCS-----PLAETLSPFHLPLNAASWVLPSKNTDKLENLEQSAIE 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PargNP_477321.2 PARG_cat 155..492 CDD:461528 18/80 (23%)
ncoa4XP_002940491.3 ARA70 48..175 CDD:463604
ARA70 236..358 CDD:463604 8/34 (24%)
Blue background indicates that the domain is not in the aligned region.

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