DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-alpha and opcml

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001072487.1 Gene:opcml / 779942 XenbaseID:XB-GENE-5831850 Length:346 Species:Xenopus tropicalis


Alignment Length:339 Identity:99/339 - (29%)
Similarity:158/339 - (46%) Gaps:37/339 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CDRNGKMLIHLLLIVSLLEAIGAFQPEFVESISNVSVAVGRDATFTCHVRHLGGYRVGWLKADTK 81
            |...|..|..||.|..:  .:.:....|.:::.||:|..|..|...|.|.: ...||.||...| 
 Frog    15 CWMFGAALTVLLSITGV--PVRSGDAGFPKAMDNVTVRQGDSAILRCTVDN-RVTRVAWLNRST- 75

  Fly    82 AIQAIHENVITHNPRVTVSHLDQNTWNLHIKAVSEEDRGGYMCQLNTD--PMKSQIGFLDVVIPP 144
             |.....:..:.:|||.:....::.:::.|:.|...|.|.|.|.:.||  |..|:: .|.|.:.|
 Frog    76 -ILYTGNDKWSIDPRVVLLANTKSQYSIEIQNVDIYDEGPYTCSVQTDNHPKTSRV-HLIVQVAP 138

  Fly   145 DFISEDTSSDVIVPEGSSVRLTCRARGYPEPIVTWRREDG--NEIVLKDNVGTKTLAPSFRGEVL 207
            ..:  :.|||:.|.|||:|.|.|.|.|.|||.||||...|  :..|..|             |.|
 Frog   139 QIL--NISSDITVNEGSTVALRCLATGRPEPAVTWRHFTGKSHRFVSDD-------------EYL 188

  Fly   208 KLSKISRNEMGSYLCIASNGVPPSVSKRISLSIHFHPVIQVPNQLVGAPLGTDVQIECHVEASPK 272
            :::.|:|::.|.|.|.|:|.|.....:::.:::::.|.|. ..:..||.||....:.|...|.|.
 Frog   189 EITGITRDQSGQYECSAANDVSAPDIRKVRVTVNYPPYIS-DTRNTGASLGQKGILRCSASAVPL 252

  Fly   273 SINYWIKDTGEMIVTSGKYHVQESSQSMYETKMSMIVRKF---QKDDVGSYRCIAKNSLGEVDSS 334
            :...|.::  |..:.:|...|:      .|.|..|.:..|   .:.|.|:|.|:|.|.||..::|
 Frog   253 AEFQWYRE--ETRLANGLDGVR------IENKDHMSILTFFNVSEKDYGNYTCVASNKLGNSNAS 309

  Fly   335 IRLYEIPGPNRNKN 348
            :.||..||...|::
 Frog   310 VILYAGPGAIHNRS 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 22/79 (28%)
Ig 51..131 CDD:299845 23/81 (28%)
I-set 144..240 CDD:254352 33/97 (34%)
IGc2 159..228 CDD:197706 27/70 (39%)
Ig 244..337 CDD:299845 26/95 (27%)
I-set 244..337 CDD:254352 26/95 (27%)
opcmlNP_001072487.1 Ig 46..134 CDD:325142 27/91 (30%)
Ig_3 138..207 CDD:316449 31/83 (37%)
ig 228..312 CDD:278476 24/92 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 58 1.000 Domainoid score I10578
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I4412
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.060

Return to query results.
Submit another query.