DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-alpha and zgc:152904

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001070212.1 Gene:zgc:152904 / 767777 ZFINID:ZDB-GENE-060929-856 Length:809 Species:Danio rerio


Alignment Length:290 Identity:70/290 - (24%)
Similarity:122/290 - (42%) Gaps:33/290 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NVSVAVGRDATFTCHVRHLGGYRVGWLKADTKAIQAIHENVITHNPRVTVSHLDQNTWNLHIKAV 114
            |.:.......||||........:|.|....         :.|.|:.:..::.::.....|.:|.:
Zfish   188 NATADYQESVTFTCVTSGSPDPQVTWYWKG---------HAIEHSEQYVLNTMNGGKSTLTVKNI 243

  Fly   115 SEEDRGGYMCQLN--TDPMKSQIGFLDVVIPPDFISEDTSSDVIVPEGSSVRLTCRARGYPEPIV 177
            .:.|.|.|||:.:  ....:||: ||.|.:.|....   ..:|...|||:..::|.|.|.|.|.:
Zfish   244 KQTDGGPYMCRASNKAGSSESQL-FLKVFVQPHITQ---LRNVTAVEGSAAMISCTAEGEPLPEI 304

  Fly   178 TWRR-EDGNEIVLKDNVGTKTLAPSFRG----EVLKLSKISRNEMGSYLCIASNGVPPSVSKRIS 237
            :||| .||:...  |...:|......||    .:|.:|.:..::.|.:.|.|.:.: ....|.:.
Zfish   305 SWRRASDGHSFT--DGEKSKDGRVEVRGRHGKSMLTISGVQLSDWGRFDCEALSRI-GGHQKSMF 366

  Fly   238 LSIHFHPVIQVPNQLVGAPLGTDVQIECHVEASPKSINYWIKDTGEMIVTSGKYHVQESS---QS 299
            |.|.:.|..|....:..:..|..|.|.|.|:::|.:...|.::. ..|.:.|..:::..|   :|
Zfish   367 LDI
EYAPKFQTNQSIFYSWEGNPVNISCEVKSNPAATMLWRRER-FTISSQGTSNIRIHSTDGRS 430

  Fly   300 MYETKMSMIVRKFQKDDVGSYRCIAKNSLG 329
            :.|      |......|.|.|.|.|:|::|
Zfish   431 LLE------VTPVSDRDFGRYNCTARNNIG 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 16/80 (20%)
Ig 51..131 CDD:299845 15/81 (19%)
I-set 144..240 CDD:254352 26/100 (26%)
IGc2 159..228 CDD:197706 22/73 (30%)
Ig 244..337 CDD:299845 22/89 (25%)
I-set 244..337 CDD:254352 22/89 (25%)
zgc:152904NP_001070212.1 Ig 1..81 CDD:299845
IG_like 2..80 CDD:214653
IGc2 97..158 CDD:197706
Ig 177..273 CDD:299845 21/94 (22%)
I-set 184..270 CDD:254352 20/91 (22%)
Ig 272..369 CDD:299845 26/102 (25%)
I-set 274..367 CDD:254352 25/98 (26%)
IG_like 385..462 CDD:214653 20/77 (26%)
IGc2 386..454 CDD:197706 19/74 (26%)
FN3 468..561 CDD:238020
fn3 <591..650 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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