Protein Alignment DIP-alpha and Negr1

DIOPT Version :10

• Sequence 1: NP_726871.1
• Gene: DIP-alpha / 31322
• FlyBaseID: FBgn0052791
• Length: 554
• Species: Drosophila melanogaster
• Sequence 2: XP_063138498.1
• Gene: Negr1 / 59318
• RGDID: 708416
• Length: 423
• Species: Rattus norvegicus
• Alignment Length: 358
• Identity: 96/358 - (26%)
• Similarity: 160/358 - (44%)
• Gaps: 60/358 - (16%)

  Fly    16 SCDRNGKMLIHLLLIVSLLEAIGAFQPEFVE----SISNVSVAVGRDATFTCHVRHLGGYRVGWL 76
            :|..|..:...||.:.|.|.|     .:.|:    ::.|:.|..|..|...|::.. |..:..||
  Rat     8 ACCSNQWLAAVLLSLCSCLPA-----GQSVDFPWAAVDNMLVRKGDTAVLRCYLED-GASKGAWL 66

  Fly    77 KADTKAIQAIHENVI-------THNPRVTVSHLDQNTWNLHIKAVSEEDRGGYMCQLNTD--PMK 132
            .         ..::|       :.:|||::|.|::..::|.|:.|...|.|.|.|.:.|.  |..
  Rat    67 N---------RSSIIFAGGDKWSVDPRVSISTLNKRDYSLQIQNVDVTDDGPYTCSVQTQHTPRT 122

  Fly   133 SQIGFLDVVIPPDFISEDTSSDVIVPEGSSVRLTCRARGYPEPIVTWRREDGNEIVLKDNVGTKT 197
            .|: .|.|.:||...  |.|:|:.:.||::|.|||.|.|.|||.::||.
  Rat   123 MQV-HLTVQVPPKIY--DISNDMTINEGTNVTLTCLATGKPEPAISWRH---------------- 168

  Fly   198 LAPSFR----GEVLKLSKISRNEMGSYLCIASNGVP-PSVSKRISLSIHFHPVIQVPNQLVGAPL 257
            ::||.:    |:.|.:..|:|::.|.|.|.|.|.|. |.| |::.:.::|.|.||........|
  Rat   169 ISPSAKPFENGQYLDIYGITRDQAGEYECSAENDVSFPDV-KKVRVVVNFAPTIQEIKSGTVTP- 231

  Fly   258 GTDVQIECHVEASPKSINYWIKDTGEMIVTSGKYHVQESSQSMYETKMSMIVRKFQKDDVGSYRC 322
            |....|.|.....|.....|.|  ||..:.:|:..:...:   :.|:..:.|....::..|:|.|
  Rat   232 GRSGLIRCEGAGVPPPAFEWYK--GEKRLFNGQQGIIIQN---FSTRSILTVTNVTQEHFGNYTC 291

  Fly   323 IAKNSLGEVDSSIRLYEIPGPNRNKNPLNGGGK 355
            :|.|.||..::|:.|.:|..|. ..:|:...|:
  Rat   292 VAANKLGTTNASLPLNQIIEPT-TSSPVTSPGQ 323

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
DIP-alpha	NP_726871.1	IG_like	49..129	CDD:214653	21/86 (24%)
		Ig strand B	59..63	CDD:409353	1/3 (33%)
		Ig strand C	72..76	CDD:409353	0/3 (0%)
		Ig strand E	103..111	CDD:409353	1/7 (14%)
		Ig	152..240	CDD:472250	30/92 (33%)
		Ig strand B	163..167	CDD:409275	2/3 (67%)
		Ig strand C	176..180	CDD:409275	0/3 (0%)
		Ig strand E	205..209	CDD:409275	1/3 (33%)
		Ig strand F	219..224	CDD:409275	2/4 (50%)
		Ig strand G	233..236	CDD:409275	1/2 (50%)
		Ig	244..337	CDD:472250	23/92 (25%)
		Ig strand B	261..265	CDD:409353	1/3 (33%)
		Ig strand C	274..278	CDD:409353	0/3 (0%)
		Ig strand E	305..309	CDD:409353	0/3 (0%)
		Ig strand F	319..324	CDD:409353	2/4 (50%)
		Ig strand G	332..335	CDD:409353	0/2 (0%)
Negr1	XP_063138498.1	None