DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-alpha and igsf9bb

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:XP_009293693.1 Gene:igsf9bb / 569554 ZFINID:ZDB-GENE-091112-15 Length:1439 Species:Danio rerio


Alignment Length:421 Identity:110/421 - (26%)
Similarity:160/421 - (38%) Gaps:81/421 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QPEFVESISNVSVAVGRDATFTCHVRH-LGG--YRVGWLKADTKAIQAIHENVITHNPRVTVSHL 102
            :|:||.|.:..:|.:|      |.|.| |.|  |.|.|.|........|       |.|....|:
Zfish    29 EPQFVTSRAGETVILG------CDVVHPLNGQPYVVEWFKFGVPIPFFI-------NFRFYPPHV 80

  Fly   103 D---------QNTWNLHIKAVSEEDRGGYMC-------QLNTDPMKSQIGFLDVVIPPDFISEDT 151
            |         ....:|.|:.|..||:|.|.|       |.:|....|.: .|.|..||.|  .||
Zfish    81 DPEYAGRASLHGKSSLRIERVRSEDQGWYECKVLMLEQQYHTFHNGSWV-HLTVNAPPTF--TDT 142

  Fly   152 SSDVI-VPEGSSVRLTCRARGYPEPIVTWRREDGNEIVLKDNVGTKTLAPSFRGEVLKLSKISRN 215
            ....: ..||.|:.|:|.|.|.|:|.|:|.|| ||.:  :|:...|....|     |.|..|||.
Zfish   143 PPQYVEAKEGGSITLSCTAFGNPKPSVSWLRE-GNPV--QDSTKYKVSDGS-----LTLVSISRE 199

  Fly   216 EMGSYLCIASNGVPPSVSKRISLSIHFHPVIQVPNQLVGAPLGTDVQIECHVEASPKSINY---W 277
            :.|:|.|.|.:....:| ....|.:...|.|..|.:.:...:..|....|..||.|.::.|   |
Zfish   200 DRGAYTCRAYSEQGEAV-HTTRLLVQGPPFIVSPPENITVNISQDAFFTCQAEAYPGNLTYTWFW 263

  Fly   278 IKDT---------GEMIVTSGKYHVQESSQSMYETKMSMIVRKFQKDDVGSYRCIAKNSLGEVDS 333
            .:|.         ...|:..|                |:|:.:.:.:|.|.|.|...||||...|
Zfish   264 EEDNVFFKNDLKRRVSILIDG----------------SLIISQVKPEDAGKYTCSPSNSLGRPPS 312

  Fly   334 SIRLYEIPGPNR--NKNPLNGGGKGGGAGGSLDADAN---DILKQKQQ---VKVTYQPEDEELQY 390
            :.....:..|.|  |..|:.....|.........|||   ..:|.|:.   :::...|...:::.
Zfish   313 ASAYLTVHYPARVINMPPVIYVAIGLPGYIRCPVDANPPVTSVKWKKDGLPLRIEKYPGWSQMED 377

  Fly   391 GSVEDFEAEGGEGGGLTPLSPHVYYTSGNKP 421
            ||:...|......|..|.:..:...|.|..|
Zfish   378 GSIRVSEVTEDSLGTYTCVPYNSLGTMGPSP 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 25/98 (26%)
Ig 51..131 CDD:299845 26/98 (27%)
I-set 144..240 CDD:254352 33/96 (34%)
IGc2 159..228 CDD:197706 27/68 (40%)
Ig 244..337 CDD:299845 24/104 (23%)
I-set 244..337 CDD:254352 24/104 (23%)
igsf9bbXP_009293693.1 IG_like 30..113 CDD:214653 28/95 (29%)
Ig 41..113 CDD:143165 24/84 (29%)
IG_like 144..223 CDD:214653 29/87 (33%)
IGc2 151..208 CDD:197706 26/64 (41%)
I-set 227..319 CDD:254352 24/107 (22%)
Ig <263..319 CDD:299845 15/71 (21%)
Ig_2 326..414 CDD:290606 17/83 (20%)
IG_like 329..403 CDD:214653 13/73 (18%)
IG_like 424..504 CDD:214653
Ig 440..504 CDD:299845
FN3 509..604 CDD:238020
FN3 620..704 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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