DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-alpha and sdk1a

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:XP_009297968.1 Gene:sdk1a / 558391 ZFINID:ZDB-GENE-081104-374 Length:2245 Species:Danio rerio


Alignment Length:304 Identity:72/304 - (23%)
Similarity:125/304 - (41%) Gaps:43/304 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 VGRDATFTCHVRHLGGYRVGWLKADTKAIQAIHENVITHNPRVTVSHLDQNTWNLHIKAVSEEDR 119
            |.:.....|..|.:...::.|.| |...:..:      :|||..:.    ::..|.::.:...|.
Zfish   430 VEKSVDIQCQARGVPMPKLEWYK-DAVPLSKL------NNPRYKII----SSMGLQVRKLQPSDA 483

  Fly   120 GGYMCQLNTDPMKSQI-GFLDVV-IPPDFISEDTSSDVIVPEGSSVRLTCRARGYPEPIVTWRRE 182
            |.:.|.......::|: .:|||. :.|.|.:...  |:.|.:|:....|||..|.|:|.:.|||:
Zfish   484 GIFQCFARNSAGEAQVHTYLDV
TSMAPAFTAPPL--DITVTDGAVAAFTCRVSGAPKPAIVWRRD 546

  Fly   183 DGNEIVLKDNVGTKTLAPSF---RGEVLKLSKISRNEMGSYLCIASNGVPPSVSKRISLSIHFHP 244
              .:|:...:|    ..|.|   ....|::..:...:.|:|.|.|:|. ..:::...||::....
Zfish   547 --TQILASGSV----QIPRFTLLESGGLQIQPVVLQDTGNYTCYAANS-EGAINASASLTV
WSRT 604

  Fly   245 VIQVPNQLVGAPLGTDVQIECHVEASPK-SINY-WIKDTGEMIVT---SGKYHVQESSQSMYETK 304
            .|..|........||...:||.....|: .:.| |.||  |.:|:   .|:..:||.|..:.:| 
Zfish   605 SISSPPTDRRVIKGTTAILECGATHDPRVGVRYVWKKD--EELVSHSRGGRISLQEGSLHISQT- 666

  Fly   305 MSMIVRKFQKDDVGSYRCIAKNSLGEVDSSIRL--YEIPGPNRN 346
                    ...|:|:|.|...:..|......||  .|:|...||
Zfish   667 --------WSGDIGNYTCDVISEAGNESKEARLEVIELPHSPRN 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 13/73 (18%)
Ig 51..131 CDD:299845 13/75 (17%)
I-set 144..240 CDD:254352 26/98 (27%)
IGc2 159..228 CDD:197706 20/71 (28%)
Ig 244..337 CDD:299845 23/97 (24%)
I-set 244..337 CDD:254352 23/97 (24%)
sdk1aXP_009297968.1 I-set 125..208 CDD:254352
Ig 125..204 CDD:299845
IG_like 222..302 CDD:214653
Ig 236..287 CDD:299845
Ig_3 322..394 CDD:290638
I-set 323..412 CDD:254352
I-set 416..505 CDD:254352 15/85 (18%)
Ig 436..500 CDD:299845 13/74 (18%)
I-set 510..600 CDD:254352 26/98 (27%)
Ig 527..600 CDD:299845 21/79 (27%)
I-set 605..693 CDD:254352 25/98 (26%)
Ig 610..693 CDD:299845 23/93 (25%)
FN3 697..788 CDD:238020 3/6 (50%)
fn3 800..886 CDD:278470
FN3 901..997 CDD:238020
FN3 1002..1090 CDD:238020
FN3 1100..1196 CDD:238020
FN3 1206..1301 CDD:238020
FN3 1308..1397 CDD:238020
FN3 1408..1501 CDD:238020
FN3 1507..1602 CDD:238020
FN3 1616..1722 CDD:238020
FN3 1732..1825 CDD:238020
FN3 1830..1919 CDD:238020
FN3 1931..2021 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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