DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-alpha and opcml

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001005580.1 Gene:opcml / 449538 ZFINID:ZDB-GENE-040927-3 Length:342 Species:Danio rerio


Alignment Length:305 Identity:90/305 - (29%)
Similarity:144/305 - (47%) Gaps:46/305 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NVSVAVGRDATFTCHVRHLGGYRVGWLKADTKAIQAIHENVITHN------PRVTVSHLDQNTWN 108
            |::|..|..|...|.:.:... ||.||...|        .:.|.|      |||.:.:...|.::
Zfish    41 NITVRQGDSAVLKCSMDNKVS-RVAWLNRTT--------ILFTGNEKWSLDPRVVLLNTAVNEYS 96

  Fly   109 LHIKAVSEEDRGGYMCQL--NTDPMKSQIGFLDVVIPPDFISEDTSSDVIVPEGSSVRLTCRARG 171
            :.|..|:..|.|.|:|.:  |..|..::: .|.|.:|...:  :.|:||.|.|||:|.|.|.|.|
Zfish    97 IKILNVNLYDEGPYVCSILTNKKPESTKV-HLIVQVPARIV--NVSTDVSVNEGSNVSLMCLAIG 158

  Fly   172 YPEPIVTW--RREDGNEIVLKDNVGTKTLAPSFRGEVLKLSKISRNEMGSYLCIASNGVPPSVSK 234
            .|||.:.|  |...||.||.:             ||.::::.|:::..|||.||.||.:.|...:
Zfish   159 RPEPSILWKFRSSKGNRIVTE-------------GEYVEMTGITKDMSGSYDCITSNDISPPDVR 210

  Fly   235 RISLSIHFHPVIQVPNQLVGAPLGTDVQIECHVEASPKSINYWIKDTGEMIVTSGKYHVQESSQS 299
            .:.:::::.|||..... .|..:|....:.|...|.|.:...|.|  ||..:.:|...|:..::.
Zfish   211 TVQVTVNYPPVISRARS-TGTAVGQKGVLWCEASAVPLADFQWFK--GERRILNGFNGVKIENKG 272

  Fly   300 MYETKMSMIV-RKFQKDDVGSYRCIAKNSLGEVDSSIRLYEIPGP 343
                |.||:. ....::|.|:|.|:|.|:||..::||.||   ||
Zfish   273 ----KQSMLTFFNVSEEDYGNYTCVAINTLGITNASIILY---GP 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 23/86 (27%)
Ig 51..131 CDD:299845 22/87 (25%)
I-set 144..240 CDD:254352 32/97 (33%)
IGc2 159..228 CDD:197706 27/70 (39%)
Ig 244..337 CDD:299845 27/93 (29%)
I-set 244..337 CDD:254352 27/93 (29%)
opcmlNP_001005580.1 Ig 41..129 CDD:299845 25/97 (26%)
IG_like 41..129 CDD:214653 25/97 (26%)
IG_like 139..216 CDD:214653 32/89 (36%)
IGc2 146..202 CDD:197706 25/68 (37%)
I-set 219..307 CDD:254352 27/94 (29%)
ig 223..307 CDD:278476 24/90 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I4644
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26286
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3058
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.900

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