DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-alpha and Ama

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster


Alignment Length:340 Identity:92/340 - (27%)
Similarity:155/340 - (45%) Gaps:30/340 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KMLIHLL--LIVSLLEAIGAFQPEFVESISNVSVAVGRDATFTCHVRHLGGYRVGWLK----ADT 80
            ::||.|:  |.:||...:.|  |...:...:|..:||....|.|.|..:|...|.|.|    :||
  Fly    13 RLLIGLIFCLAISLDSVLSA--PVISQISKDVVASVGDSVEFNCTVEEVGQLSVSWAKRPSESDT 75

  Fly    81 KAIQAIHENVIT-----HNPRVTVS-HLDQNTWNLHIKAVSEEDRGGYMCQL---NTDPMKSQIG 136
            .::.....|:::     :|..||.. ......:...|:.:...|.|.|.||:   .|:.:..::.
  Fly    76 NSVVLSMRNILSLPDQRYNVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSATEKVTKKLS 140

  Fly   137 FLDVVIPPDFISEDTSSDVIVPEGSSVRLTCRARGYPEPIVTWRREDGNEIVLKDNVGTKTLAPS 201
             |.:..|| .|:|:|....:|.||.::.|||.|.|:|:|.::|.||. |.::   ..|...||. 
  Fly   141 -LQIKTPP-VIAENTPKSTLVTEGQNLELTCHANGFPKPTISWAREH-NAVM---PAGGHLLAE- 198

  Fly   202 FRGEVLKLSKISRNEMGSYLCIASNGVPPSVSKRISLSIHFHPVIQVPNQLVGAPLGTDVQIECH 266
               ..|::..:.|.:.|.|.|||.||......:.|.:.:.|.|.|.|....:...:....::||.
  Fly   199 ---PTLRIRSVHRMDRGGYYCIAQNGEGQPDKRLIRVEVEFRPQIAVQRPKIAQMVSHSAELECS 260

  Fly   267 VEASPKSINYWIKDTGEMIVTSGKYHVQESSQSMYETKMSMIVRKFQKDDVGSYRCIAKNSLGEV 331
            |:..|.....|.|: |..:.:|..:.|..::.|...|...:.:....::|.|.|.|.|.|.||..
  Fly   261 VQGYPAPTVVWHKN-GVPLQSSRHHEVANTASSSGTTTSVLRIDSVGEEDFGDYYCNATNKLGHA 324

  Fly   332 DSSIRLYE--IPGPN 344
            |:.:.|::  ||.|:
  Fly   325 DARLHLFQTVIPVPS 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 22/92 (24%)
Ig 51..131 CDD:299845 23/92 (25%)
I-set 144..240 CDD:254352 31/95 (33%)
IGc2 159..228 CDD:197706 24/68 (35%)
Ig 244..337 CDD:299845 23/92 (25%)
I-set 244..337 CDD:254352 23/92 (25%)
AmaNP_731114.2 I-set 33..143 CDD:254352 25/110 (23%)
Ig 37..127 CDD:299845 21/89 (24%)
IG_like 154..234 CDD:214653 27/87 (31%)
IGc2 161..223 CDD:197706 25/69 (36%)
I-set 254..330 CDD:254352 20/76 (26%)
IGc2 254..322 CDD:197706 17/68 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3058
SonicParanoid 1 1.000 - - X97
54.850

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