DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-alpha and CG13506

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001286718.1 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster


Alignment Length:445 Identity:89/445 - (20%)
Similarity:156/445 - (35%) Gaps:139/445 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PEFVESISNVSVAVGRDATFTCHVRHLG-GYRVGWLKADTKAIQAIHENVITHNPRVTVSHLDQN 105
            |.|..:...|....|.|....|..|:.. ...|.|.|  .:.|.|..:|.|:...:..:::    
  Fly    70 PYFDVTDLRVEAKPGDDVILNCDARNFQLSNAVVWYK--NRIIIANGQNPISQRVQCMLNN---- 128

  Fly   106 TWNLHIKAVSEEDRGGYMCQLNTDPMKSQIGFLDVVIPPDFISEDTSSDVIVPEGSSVRLTCRAR 170
              ::.::.||.||...|.|:                |.|..:.:.|:..|    |:.:.:.|..|
  Fly   129 --SILLRNVSPEDSDDYYCE----------------ILPQRVRQHTALRV----GARLSILCDDR 171

  Fly   171 GYPEPIVTWRREDGNEI----VLKDNVGTKTLAPSFRGE---------VLKLSKISRNEMGSYLC 222
            ...:...|:|:.|.:::    .|.||...|.......|:         |:.|..:.....|.|.|
  Fly   172 DITDRSQTFRQGDHHKLECRTYLPDNATIKWSFNDLNGQPSSVDNQNGVIILDNVDEKNAGDYQC 236

  Fly   223 IASNGV--PPSVSKRISLSIHFHPVIQVPNQLVGAPLGTDVQIECHVEASPKSINYWIKDTGEMI 285
            :|.:|.  ||..:  :.:.:.:.|::......|....|...::.|:..|.|...:|:||| |:.:
  Fly   237 LADDGSRHPPHGT--VHIDVQYSPIVSTHRHNVNTEKGATAELYCNYRAKPIGRSYFIKD-GKTL 298

  Fly   286 VTSGKYHVQESSQSMYETKMSMIVRKFQKDDVGSYRCIAKNSLGEVDSSIRLYEIPGPNRNKNPL 350
            ..|.||.:::|..:.: .:.::|||:....|:|.|.|..:|::|                     
  Fly   299 QLSDKYSLKDSVHNDH-NRTTLIVREVTDSDLGEYLCQVENAIG--------------------- 341

  Fly   351 NGGGKGGGAGGSLDADANDILKQKQQVKVTYQPEDEELQYGSVEDFEAEGGEGGGLTPLSPHVYY 415
                            :|::     :|.|:|.||..:.:..:||                     
  Fly   342 ----------------SNEV-----KVHVSYNPETPQFEDMTVE--------------------- 364

  Fly   416 TSGNKPATHKPGNSGGNQHLHQ--------------------QHHHHHHHNNNNN 450
              |||...|....|      ||                    |....|.|||.:|
  Fly   365 --GNKVTLHWLVRS------HQLLSEAMLDYQLTGSYTWSTVQVLETHRHNNTDN 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 18/80 (23%)
Ig 51..131 CDD:299845 18/80 (23%)
I-set 144..240 CDD:254352 23/110 (21%)
IGc2 159..228 CDD:197706 17/81 (21%)
Ig 244..337 CDD:299845 24/92 (26%)
I-set 244..337 CDD:254352 24/92 (26%)
CG13506NP_001286718.1 IG_like 79..146 CDD:214653 17/74 (23%)
IGc2 83..146 CDD:197706 16/70 (23%)
IG_like 176..254 CDD:214653 17/79 (22%)
Ig 176..239 CDD:299845 13/62 (21%)
I-set 258..349 CDD:254352 26/134 (19%)
Ig 275..348 CDD:143165 22/116 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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