DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-alpha and DIP-theta

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster


Alignment Length:500 Identity:176/500 - (35%)
Similarity:260/500 - (52%) Gaps:93/500 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PEFVESISNVSVAVGRDATFTCHVRHLGGYRVGWLKADTKAIQAIHENVITHNPRVTVSHLDQNT 106
            |:|.|.:.||:|.|.|:|...|.|.:|..|::.||:.||:.|..|..:|||.|.|::::|.::..
  Fly   130 PKFGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNHRMSITHAEKRA 194

  Fly   107 WNLHIKAVSEEDRGGYMCQLNTDPMKSQIGFLDVVIPPDFISEDTSSDVIVPEGSSVRLTCRARG 171
            |.|.|:.|.|.|:|.||||:||||||||:|:||||:|||.:...||:|:::.|||:|.|.|.|.|
  Fly   195 WILRIRDVKESDKGWYMCQINTDPMKSQVGYLDVVVPPDILDYPTSTDMVIREGSNVTLKCAATG 259

  Fly   172 YPEPIVTWRREDGNEIVLKDNVGTKTLAPSFRGEVLKLSKISRNEMGSYLCIASNGVPPSVSKRI 236
            .|.|.:|||||.|..|.|.:  |.:.:|  :.|..|.::|::|..||:||||||||:||:||||:
  Fly   260 SPTPTITWRREGGELIPLPN--GAEAVA--YNGSFLTIAKVNRLNMGAYLCIASNGIPPTVSKRV 320

  Fly   237 SLSIHFHPVIQVPNQLVGAPLGTDVQIECHVEASPKSINYWIKDTGEMIVTSGKYHVQESSQSMY 301
            .|.:||.|:|.:.||||||.|..::.:||..||.|||||||:|:  :.|:..|:..|.|:.:|.|
  Fly   321 MLIVHFPPMIWIQNQLVGAALTQNITLECQSEAYPKSINYWMKN--DTIIVPGERFVPETFESGY 383

  Fly   302 ETKMSMIVRKFQKDDVGSYRCIAKNSLGEVDSSIRLYEIP------------------------- 341
            :..|.:.:.:....|.|:|||:||||||:.|.:|:||.||                         
  Fly   384 KITMRLTIYEVDIQDFGAYRCVAKNSLGDTDGAIKLYHIPQTTTMTTMAPTVSINTVPVVLVKYN 448

  Fly   342 -------GPNRNKNPLNGGGKGGGAGGSLDADANDILKQKQQVKVTYQP----EDEELQYGSVED 395
                   ..|.|.||.|                             :.|    ::.:||.|....
  Fly   449 KEQRYGSSQNSNTNPYN-----------------------------FNPGNSQQNTKLQRGKSNS 484

  Fly   396 FEAEGGEGG------GLTP--LSPHVYYTSGNKPATHKPGNSGGNQHLHQQHHHHHHHNNNNNNQ 452
            ..::....|      |.|.  .:...:::|.:..::   .:|.|..|..||||.....|:.:::.
  Fly   485 KGSDQSPSGLNNVFVGATSSLWNSQDHHSSSSSSSS---ASSRGRDHHQQQHHQQQQQNHGSDHG 546

  Fly   453 QHSGGPGGGP--TGGDAGSLGGEM-------GGITRKPP--PYYG 486
            ......|..|  |..||.||..::       |..:|..|  |..|
  Fly   547 ASYRSDGKSPHLTNHDAKSLTDDLDRMQDLKGWASRLSPISPILG 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 34/79 (43%)
Ig 51..131 CDD:299845 35/79 (44%)
I-set 144..240 CDD:254352 46/95 (48%)
IGc2 159..228 CDD:197706 33/68 (49%)
Ig 244..337 CDD:299845 41/92 (45%)
I-set 244..337 CDD:254352 41/92 (45%)
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 45/92 (49%)
IG_like 137..230 CDD:214653 45/92 (49%)
IG_like 240..324 CDD:214653 43/87 (49%)
IGc2 247..310 CDD:197706 31/66 (47%)
Ig 327..419 CDD:299845 41/93 (44%)
IG_like 343..420 CDD:214653 32/78 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I11903
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I4644
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26286
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12231
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3058
SonicParanoid 1 1.000 - - X97
99.000

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