DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-alpha and Mdga1

DIOPT Version :10

Sequence 1:NP_726871.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001401873.1 Gene:Mdga1 / 309659 RGDID:1307031 Length:956 Species:Rattus norvegicus


Alignment Length:609 Identity:119/609 - (19%)
Similarity:206/609 - (33%) Gaps:168/609 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LLIVSLLEAIGAFQPEFVESISNVSVAVGRDATFTCHVRHLGGYRVG--WLKADTKAIQAIHENV 90
            ||:.||..|.....|:.::...|:.  :|:|...:|||..:...:|.  |.| :.|..:.....:
  Rat   324 LLVRSLKNATFQITPDMIKESENIQ--LGQDLKLSCHVDAVPQEKVNYQWFK-NGKPARTSKRLL 385

  Fly    91 ITHN----PRVTVSHLDQNTWNLHIKAVSEEDRGGYMCQLN-----TDPMKSQIGFLDVVIPPDF 146
            :|.|    |.||.|        |.:..:...|.|.|:|..:     ...:..::......:||..
  Rat   386 VTRNDPELPAVTSS--------LELIDLHFSDYGTYLCVASFPGSPVPDLSVEVNISSETVPPTI 442

  Fly   147 ISEDTSSDVIVPEGSSVRLTCRARGYPEPIVTWRREDGNEIVLKDNVGTKTLAPSFRGEVLKLSK 211
            ......:.|.|.|||...|.|..||.|.|.|.|.|.|....:|...:..:. .|..:   |::.:
  Rat   443 SVPKGRAVVTVREGSPAELQCEVRGKPRPPVLWSRVDKEAALLPSGLALEE-TPDGK---LRVER 503

  Fly   212 ISRNEMGSYLCIAS--NGVPPSVSKR---ISLSIHFHPVIQVPNQLVGAPLGTDVQIECH-VEAS 270
            :||...|:|.|..:  ||.  :|..|   :.|::||.|.::..:|.|...||..|.:.|. :..|
  Rat   504 VSREMSGTYRCQTARYNGF--NVRAREAQVQLTVHFPPEVEPSSQDVRQALGRPVLLRCSLLRGS 566

  Fly   271 PKSI--NYWIKDTGEMI---------VTSGKYHVQESSQSMYETKMSMIVRKFQKDDVGSYRCIA 324
            |:.|  ..| :..|:::         ...|..|.        |.::..:.|    |..|:|.|..
  Rat   567 PQRIASAVW-RFKGQLLPPPPVLPAAAAEGPDHA--------ELRLDALTR----DSSGNYECSV 618

  Fly   325 KNSLGEVDSSIRL----------YEIPGPNRNKNPLNGGGKGGGAGGSLDADANDILKQKQQVKV 379
            .|.:|......::          ::.|.|.|:.              .|..:.:.:|:..|:   
  Rat   619 SNDVGSATCLFQVSAKAYSPEFYFDTPNPTRSH--------------KLSKNYSYVLQWTQR--- 666

  Fly   380 TYQPE--DEELQY-----------GSVEDFEAEGGEGGGLTP---------------LSPHVYYT 416
              :|:  |..|.|           ..|:.......|.|.|..               |:|:..:.
  Rat   667 --EPDAVDPVLNYRLSIRQLNQHNAMVKAIPVRRVEKGQLLEYTLTDLRVPHSYEIHLTPYTTFG 729

  Fly   417 SGNKPA--------THKPGNSGGNQHLHQQHHHHHHHNNNNN---------NQQHSGGPGGGPTG 464
            :|:..:        .:.|..|....|...:....:..:..:|         .|.....|..||..
  Rat   730 AGDMASRVIHYTEPINSPSLSDNTCHFEDEKICGYTQDLTDNFDWTRQNALTQNPKRSPNTGPPT 794

  Fly   465 GDAGSLGG-----------EMGGITRKPPPYYGGNTEV-------------------------RG 493
            ..:|:..|           |:|...|...|.|..:.:.                         :|
  Rat   795 DISGTPEGYYMFIETSRPRELGDRARLVSPLYNASAKFYCVSFFYHMYGKHIGSLNLLVRSRNKG 859

  Fly   494 PIDNNEMSSGSGDSRLCRGHHLPI 517
            .:|.:..|.......:.:..|:||
  Rat   860 TLDTHAWSLSGNKGNVWQQAHVPI 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_726871.1 IG_like 49..129 CDD:214653 21/90 (23%)
Ig strand B 59..63 CDD:409353 0/3 (0%)
Ig strand C 72..76 CDD:409353 1/5 (20%)
Ig strand E 103..111 CDD:409353 1/7 (14%)
Ig 152..240 CDD:472250 28/92 (30%)
Ig strand B 163..167 CDD:409275 1/3 (33%)
Ig strand C 176..180 CDD:409275 1/3 (33%)
Ig strand E 205..209 CDD:409275 1/3 (33%)
Ig strand F 219..224 CDD:409275 2/4 (50%)
Ig strand G 233..236 CDD:409275 1/5 (20%)
Ig 244..337 CDD:472250 22/104 (21%)
Ig strand B 261..265 CDD:409353 1/3 (33%)
Ig strand C 274..278 CDD:409353 1/5 (20%)
Ig strand E 305..309 CDD:409353 0/3 (0%)
Ig strand F 319..324 CDD:409353 2/4 (50%)
Ig strand G 332..335 CDD:409353 0/2 (0%)
Mdga1NP_001401873.1 Ig 54..115 CDD:472250
Ig strand B 56..60 CDD:409353
Ig strand C 69..73 CDD:409353
Ig strand E 91..95 CDD:409353
Ig strand F 105..110 CDD:409353
Ig_3 132..217 CDD:464046
IG_like 248..326 CDD:214653 1/1 (100%)
Ig strand B 258..262 CDD:409353
Ig strand C 272..276 CDD:409353
Ig strand E 291..295 CDD:409353
Ig strand F 305..310 CDD:409353
Ig strand G 319..322 CDD:409353
Ig 347..418 CDD:472250 20/81 (25%)
Ig strand B 353..357 CDD:409353 0/3 (0%)
Ig strand C 368..372 CDD:409353 0/3 (0%)
Ig strand E 398..402 CDD:409353 2/11 (18%)
Ig strand F 412..417 CDD:409353 2/4 (50%)
Ig_3 439..515 CDD:464046 24/79 (30%)
Ig_3 538..620 CDD:464046 20/94 (21%)
MAM 754..917 CDD:99706 19/130 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 780..799 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.

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