DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-alpha and Vsig10

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001258265.1 Gene:Vsig10 / 304529 RGDID:1565800 Length:564 Species:Rattus norvegicus


Alignment Length:356 Identity:85/356 - (23%)
Similarity:138/356 - (38%) Gaps:98/356 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 WLKADTKAIQAIHENVITHNPRVTVSHLDQNTWNLHIKAVSEEDRGGYMCQ----LNTDPMKSQI 135
            |::..:...:::.:|            |..|::.|.:  :|:..:|.|.|.    |:....|...
  Rat   192 WIQTHSSVSESLGKN------------LSANSFTLML--MSKNLQGNYTCSATNVLSRRQRKVTT 242

  Fly   136 GFLDVVIPPDFISEDTSSDVIVPEGSSVRLTCR-ARGYPEPIVTWRREDGNEIVLKDNVGTKTLA 199
            ..|....||   |....|..:.||.:::.|||. ..|||:|...|..|.|..:|  .|...:||:
  Rat   243 ELLVYWPPP---SAPQCSAGLSPESANLELTCNWDGGYPDPTFLWTEEPGGVVV--GNSKLQTLS 302

  Fly   200 PSFRGEVLKLSKISRNEMGSYLCIASNGVPPSVSKRISLSIHFHPVIQVPNQLVGA-PL-----G 258
            ||...|..|           :.|:.|:.:.|......        |:|:.:.|:.: |:     |
  Rat   303 PSQLSEGKK-----------FKCVGSHILGPESGASC--------VVQISSPLLASRPMKTCLVG 348

  Fly   259 TDVQIECHVE-ASPKSINYWIKDTGE---MIVTSGKYHVQESSQSMYETKMSMIVRKFQKD-DVG 318
            .||.:.|.|| |:|.:...|:::..:   .|..|.:|.:.:..||     .|:.:....:| |.|
  Rat   349 GDVTLTCQVEGANPPARIQWLRNLTQPETAIQPSSRYVITQQGQS-----SSLTIHNCSQDQDGG 408

  Fly   319 SYRCIAKNSLGEVDSSIRLYEIPGPNRNKNPLNGGGKGG-------------------------- 357
            .|.|.|:|.:|...:.|.|       ..|.|||.||..|                          
  Rat   409 FYFCRAENPVGVRAADIWL-------SVKEPLNVGGIVGTVVSLLLLGLAIVSGLMLYYSPAFCW 466

  Fly   358 GAGGSL-DADANDILKQKQQVKVTYQPEDEE 387
            .||.:| ..|..|::     |.|..:.|:||
  Rat   467 KAGSTLRGQDMGDVM-----VLVDSEEEEEE 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 10/57 (18%)
Ig 51..131 CDD:299845 10/59 (17%)
I-set 144..240 CDD:254352 26/96 (27%)
IGc2 159..228 CDD:197706 21/69 (30%)
Ig 244..337 CDD:299845 28/103 (27%)
I-set 244..337 CDD:254352 28/103 (27%)
Vsig10NP_001258265.1 Ig 60..146 CDD:299845
IG_like 60..145 CDD:214653
IG_like 165..246 CDD:214653 11/67 (16%)
Ig 175..241 CDD:143165 11/62 (18%)
Ig_3 255..318 CDD:290638 22/75 (29%)
IG_like 347..429 CDD:214653 25/93 (27%)
Ig 351..426 CDD:143165 21/79 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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