DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-alpha and PRTG

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_776175.2 Gene:PRTG / 283659 HGNCID:26373 Length:1150 Species:Homo sapiens


Alignment Length:468 Identity:108/468 - (23%)
Similarity:167/468 - (35%) Gaps:110/468 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FQFTSCDRNGKML---IHLLLIVSLLEAIGAFQPEFVESISNVSVAVGRDATFTCHVRHLGGYRV 73
            :|..:.::.|.:|   .||     .|..|.||:   |:.|| ..|..|..|.|.|          
Human   111 YQCLAMNKYGAILSQKAHL-----ALSTISAFE---VQPIS-TEVHEGGVARFAC---------- 156

  Fly    74 GWLKADTKAIQAIHENVITHNPRVTVSHLDQNTWN-------------LHIKAVSEEDRGGYMCQ 125
                           .:.:|.|.|.....::.|..             |.|..||:.|.|.|.|.
Human   157 ---------------KISSHPPAVITWEFNRTTLPMTMDRITALPTGVLQIYDVSQRDSGNYRCI 206

  Fly   126 LNT--DPMKSQIGFLDVVIPPDFISEDTSSDVIVPEG------SSVRLTCRARGYPEPIVTWRRE 182
            ..|  ...||....|.|:...:..|..|.:.:..|:.      .:|.|.|.|.|.|:||::|.|.
Human   207 AATVAHRRKSMEASLTVIPAKESKSFHTPTIIAGPQNITTSLHQTVVLECMATGNPKPIISWSRL 271

  Fly   183 DGNEIVLKDNVGTKTLAPSFRGEVLKLSKISRNEMGSYLCIASN-GVPPSVSKRISLSIHFHP-V 245
            |...|   |...|:.|.   .|. |.:|.:.....|.|:|.|:. |.........:|::...| .
Human   272 DHKSI---DVFNTRVLG---NGN-LMISDVRLQHAGVYVCRATTPGTRNFTVAMATLTVLAPPSF 329

  Fly   246 IQVPNQLVGAPLGTDVQIECHVEASPKSINYWIKDTGEMIVTSGKYHVQESSQSMYETKMSMIVR 310
            ::.|..|.....|| .:..|..|..|.....|:|: |..|.::|:.       .||.:|  :::.
Human   330 VEWPESLTRPRAGT-ARFVCQAEGIPSPKMSWLKN-GRKIHSNGRI-------KMYNSK--LVIN 383

  Fly   311 KFQKDDVGSYRCIAKNSLGEVDSSIRLYEIPGPNRNKNPLNGGGKGGGAGGSLDADANDILKQKQ 375
            :...:|...|:|:|:||.|.:.|..||..:...:|...|.|...:...:...|.|....:..   
Human   384 QIIPEDDAIYQCMAENSQGSILSRARLTVVMSEDRPSAPYNVHAETMSSSAILLAWERPLYN--- 445

  Fly   376 QVKVTYQPEDEELQYGSVEDFEAEGGEG----------------GGLTPLSPHVYYTSGNKPATH 424
                    .|:.:.| ||...:|||...                ..|.|.|.:.:|.....|.  
Human   446 --------SDKVIAY-SVHYMKAEGLNNEEYQVVIGNDTTHYIIDDLEPASNYTFYIVAYMPM-- 499

  Fly   425 KPGNSGGNQHLHQ 437
              |.|..:.|:.|
Human   500 --GASQMSDHVTQ 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 19/94 (20%)
Ig 51..131 CDD:299845 18/94 (19%)
I-set 144..240 CDD:254352 27/102 (26%)
IGc2 159..228 CDD:197706 22/75 (29%)
Ig 244..337 CDD:299845 24/93 (26%)
I-set 244..337 CDD:254352 24/93 (26%)
PRTGNP_776175.2 Ig 40..130 CDD:299845 5/23 (22%)
Ig 139..223 CDD:299845 24/109 (22%)
IG_like 141..223 CDD:214653 23/107 (21%)
IG_like 241..323 CDD:214653 25/88 (28%)
IGc2 250..309 CDD:197706 22/65 (34%)
I-set 327..412 CDD:254352 26/95 (27%)
Ig 345..412 CDD:299845 21/76 (28%)
FN3 419..512 CDD:238020 20/108 (19%)
FN3 517..610 CDD:238020
fn3 624..699 CDD:278470
FN3 726..814 CDD:238020
FN3 821..911 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 981..1002
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1086..1150
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.