DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-alpha and DIP-lambda

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster


Alignment Length:421 Identity:156/421 - (37%)
Similarity:226/421 - (53%) Gaps:68/421 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PEFVESISNVSVAVGRDATFTCHVRHLGGYRVGWLKADTKAIQAIHENVITHNPRVTVSHLDQNT 106
            |:|:..:||.:|.:|||.:|||.|.:||.|||.|:|:|:|||..||.::::.|||::|:|...||
  Fly    50 PQFLAKLSNTTVPIGRDISFTCVVDNLGHYRVAWIKSDSKAILGIHTHMVSLNPRLSVTHNGHNT 114

  Fly   107 WNLHIKAVSEEDRGGYMCQLNTDPMKSQIGFLDVVIPPDFIS--EDTSSDVIVPEGSSVRLTCRA 169
            |.|||..|...|.|.||||:|||||||..|:||||:|||.::  |....|.:..||.|:.|.|..
  Fly   115 WKLHISRVQINDSGSYMCQVNTDPMKSLSGYLDVVVPPDILNHPEHNPEDGVCQEGGSISLMCSV 179

  Fly   170 RGYPEPIVTWRREDGNEIVLKDNVGTKTLAPSFRGEVLKLSKISRNEMGSYLCIASNGVPPSVSK 234
            .|.|.|.|.||||.|.||:|:.:...||...|..||.|.|:.:.|::||.|.||||||:||||||
  Fly   180 TGVPRPKVLWRREAGKEIILRTDGRDKTGFKSVEGERLVLTNVQRSDMGGYNCIASNGIPPSVSK 244

  Fly   235 RISLSIHFHPVIQVPNQLVGAPLGTDVQIECHVEASPKSINYWIKDTGEMIVTSG-KYHVQESSQ 298
            |.::.::|.|.::..:||||||:..:|.:||.||..||.:|.|.:..|.:.:.:| ||::.|...
  Fly   245 RFNVYVNFSPTVKAISQLVGAPVEREVTLECIVEVFPKPLNGWYRSEGNIKLHNGNKYNISEEVI 309

  Fly   299 SMYETKMSMIVRKFQKDDVGSYRCIAKNSLGEVDSSIRLYEIPGPNRNKNPLNGGGKGGGAGGSL 363
            ::|...:::.:|...|.|.|:|.|.:.|:||:.:|.|||.|:..|                    
  Fly   310 NIYTWHLNLTIRHLTKSDFGTYSCSSVNALGKSESLIRLQELRLP-------------------- 354

  Fly   364 DADANDILKQKQQVKVTYQPEDEELQYGSVEDFEAEGGEGGGLTPLSPHVYYTSGNK---PATHK 425
                         .|:|..|                          :||:..|..::   ||:||
  Fly   355 -------------PKLTTTP--------------------------TPHMQTTGKSRRKHPASHK 380

  Fly   426 PGNSGGNQHLHQQHHHHHHHNNNNNNQQHSG 456
               .|.|:.|..|..|..:.....|...:.|
  Fly   381 ---KGLNEVLRFQETHFANQIQQENEDHNEG 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 42/79 (53%)
Ig 51..131 CDD:299845 42/79 (53%)
I-set 144..240 CDD:254352 45/97 (46%)
IGc2 159..228 CDD:197706 33/68 (49%)
Ig 244..337 CDD:299845 33/93 (35%)
I-set 244..337 CDD:254352 33/93 (35%)
DIP-lambdaNP_001334747.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I11903
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I4644
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8732
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
77.070

Return to query results.
Submit another query.