DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-alpha and Lrit3

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:445 Identity:86/445 - (19%)
Similarity:134/445 - (30%) Gaps:188/445 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPVSAKRLLRNFQFTSCDRNGKMLIHLLLIVSLLEAIGAFQPEFVESISNVSVAVGRDATFTCHV 65
            :|..|.|.|||  .|..|.:...|..|             .|:|::|.|:::|...|...|.   
Mouse   144 VPNEAVRYLRN--LTCLDLSSNRLTTL-------------PPDFLDSWSHLAVTPSRSPDFP--- 190

  Fly    66 RHLGGYRVGWLKADTKAIQAIHENVITHNPRVTVSHLDQNTW--NLHIKAVSEEDRGGYMCQLNT 128
                                         ||..:..|..|.|  :.||..|.|..:......:..
Mouse   191 -----------------------------PRRIILGLQDNPWFCDCHISKVIELSKVTDHAVVLL 226

  Fly   129 DPMK--------SQIGF----LDVVIPPDFISEDTSSDVIVPEGSSVRLTCRARGYPEPIVTWRR 181
            ||:.        ..|.|    |:..:.|..:...|.  :....||:|.|.|.|:|:|.|.:||.|
Mouse   227 DPLMVCSEPERFQGILFQRVELEKCLKPSVMMSATK--ITSALGSNVLLRCDAKGHPTPQLTWTR 289

  Fly   182 EDG---NEIVLKDNVGTKTLAPSFRGEVLKLSKISRNEMGSYLCIASN----------------- 226
            .||   |..|::::.|     ...|..::.|:.||..:.|.|.|.|.|                 
Mouse   290 SDGSTVNYTVIQESPG-----EGIRWSIISLTSISHKDAGDYRCKAKNLAGISEAVVTVTVVGGV 349

  Fly   227 -------------GVPP------------------------------------------------ 230
                         |.||                                                
Mouse   350 TTTLSPDSSERSPGEPPEQHPQPGLGGSTPPSKSWLSPGLTSAPSYPTPSAALYTSTWSPPPSSL 414

  Fly   231 ---------------SVSKRISLSIHFHPVIQVPNQLVGA----------PLGTDVQIECHV--E 268
                           |:|.|.:.:.|..|::. |.....|          ||....:.|..:  :
Mouse   415 PPIFSAASATTSVQTSISGRTARTSHQPPLLH-PGGKSNAKIEKNGRKFPPLSASKKEELALLDQ 478

  Fly   269 ASPKSINYWIKD------TGEMIVTSGKYHVQESSQSMYETKMSMIVRKFQKDDV 317
            |:|...|..|||      ||..:..     :..||.|..|:.::::..|:.:.|:
Mouse   479 AAPMETNVTIKDLRVARETGVSVTL-----MWNSSSSTQESSVTVLYSKYGEKDL 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 13/81 (16%)
Ig 51..131 CDD:299845 13/81 (16%)
I-set 144..240 CDD:254352 34/191 (18%)
IGc2 159..228 CDD:197706 26/101 (26%)
Ig 244..337 CDD:299845 20/92 (22%)
I-set 244..337 CDD:254352 20/92 (22%)
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79
LRR_8 61..117 CDD:290566
LRR 2. /evidence=ECO:0000255 80..103
leucine-rich repeat 83..106 CDD:275378
LRR 3. /evidence=ECO:0000255 104..128
LRR_8 105..165 CDD:290566 8/22 (36%)
LRR_4 106..146 CDD:289563 0/1 (0%)
leucine-rich repeat 107..130 CDD:275378
LRR_4 129..170 CDD:289563 10/40 (25%)
LRR 4. /evidence=ECO:0000255 129..151 2/6 (33%)
leucine-rich repeat 131..154 CDD:275378 4/9 (44%)
LRR 5. /evidence=ECO:0000255 152..175 9/37 (24%)
leucine-rich repeat 155..168 CDD:275378 3/12 (25%)
Ig 254..335 CDD:299845 28/87 (32%)
IG_like 263..339 CDD:214653 26/80 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..391 3/40 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..464 7/39 (18%)
FN3 489..563 CDD:238020 10/45 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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