DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-alpha and Ncam1

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:XP_006510118.1 Gene:Ncam1 / 17967 MGIID:97281 Length:1162 Species:Mus musculus


Alignment Length:328 Identity:78/328 - (23%)
Similarity:118/328 - (35%) Gaps:77/328 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 GRDATFTCHV----------RHLGGYRVGWLKADTKAIQAIHENVITHNPRVTVSHLDQNTWNLH 110
            |.||...|.|          :|.|  |...||.|.:.|      |:::|             .|.
Mouse   132 GEDAVIVCDVVSSLPPTIIWKHKG--RDVILKKDVRFI------VLSNN-------------YLQ 175

  Fly   111 IKAVSEEDRGGYMCQLNTDPMKSQIGFLD----VVIPPDFISEDTSSDVIVPEGSSVRLTCRARG 171
            |:.:.:.|.|.|.|: .....:.:|.|.|    |.:||...:..:..:.....|.||.|.|.|.|
Mouse   176 IRGIKKTDEGTYRCE
-GRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADG 239

  Fly   172 YPEPIVTWRREDGNEIVLKDNVGTKTLAPSFRGEVLKLSKISRNEMGSYLCIASNGVPPSVSKRI 236
            :|||.::|.: ||..|..::....|.:......| |.:..:.:|:...|:|||.|..... ...|
Mouse   240 FPEPTMSWTK-DGEPIENEEEDDEKHIFSDDSSE-LTIRNVDKNDEAEYVCIAENKAGEQ-DASI 301

  Fly   237 SLSIHFHPVIQVPNQLVGAPLGTDVQIECHVEASPKSINYWIKDT-------------------- 281
            .|.:...|.|..........|...|.:.|.....|.....|...|                    
Mouse   302 HLKVFAKPKITYVENQTAMELEEQVTLTCEASGDPIPSITWRTSTRNISSEEKASWTRPEKQETL 366

  Fly   282 -GEMIVTSGKYHVQESSQSMYETKMSMIVRKFQKDDVGSYRCIAKNSLGEVDSSIRLY-----EI 340
             |.|:|.|   |.:.|         |:.::..|..|.|.|.|.|.|::|:...|:.|.     ::
Mouse   367 DGHMVVRS---HARVS---------SLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKL 419

  Fly   341 PGP 343
            .||
Mouse   420 QGP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 20/82 (24%)
Ig 51..131 CDD:299845 20/84 (24%)
I-set 144..240 CDD:254352 26/95 (27%)
IGc2 159..228 CDD:197706 23/68 (34%)
Ig 244..337 CDD:299845 24/113 (21%)
I-set 244..337 CDD:254352 24/113 (21%)
Ncam1XP_006510118.1 Ig1_NCAM-1 20..115 CDD:143273
IG 124..190 CDD:214652 19/78 (24%)
Ig3_NCAM-1_like 211..308 CDD:143207 27/99 (27%)
Ig_NCAM-1 307..413 CDD:143277 25/117 (21%)
Ig_3 417..494 CDD:372822 2/6 (33%)
FN3 509..606 CDD:238020
fn3 649..731 CDD:365830
PHA03247 <905..1140 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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