DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-alpha and Papln

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001192272.1 Gene:Papln / 170721 MGIID:2386139 Length:1302 Species:Mus musculus


Alignment Length:357 Identity:77/357 - (21%)
Similarity:120/357 - (33%) Gaps:106/357 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SNVSVAVGRDATFTCHVRHLGGYRVGWLKADTKAIQAIHENVITHNPRVTVSHLDQNTWNLHIKA 113
            |.|..|.|:.....|.......::.||.|..              .|..:..:..|...:|.|..
Mouse   934 SLVQAAPGQAVQLFCPGNIPSEFQAGWQKEG--------------RPISSNRYQLQADGSLIISR 984

  Fly   114 VSEEDRGGYMC---QLNTDPMKSQI---GFLDVVIP---PDFISEDTSSD--------------- 154
            :..||.|.|.|   :...:|.:.|:   |....|.|   |....|..:.|               
Mouse   985 LRPEDAGIYSCGSHRPGHEPQEIQLRVTGGDMAVFPEGQPRHFPEPRNPDLGHGPPHRGTGAEAG 1049

  Fly   155 ---VIVPE----------------------GSSVRLTCRARGYPEPIVTWRREDGNEIVLKDNVG 194
               |:.|.                      |..:||||||.|:|.|.:.|:| ||.         
Mouse  1050 GHRVLSPSHPRPATRLRLDRTQPGVVDASPGQRIRLTCRAEGFPVPTIEWQR-DGQ--------- 1104

  Fly   195 TKTLAPSFRGEV-----LKLSKISRNEMGSYLCIASNG-------VPPSVSKRISLSIHFHPVIQ 247
               |..|.|.:|     |.:|::...:.|.|.|:|.||       |...|.:.:::: ...|.:.
Mouse  1105 ---LVSSPRHQVQPDGSLVISRVDVEDGGYYSCVAFNGQDRDQRWVQLRVLRELTIT-GLPPAVT 1165

  Fly   248 VPNQLVGAPLGTDVQIECHVEASPKSINYWIKDTGEMIVTSGKYHVQESSQSMYETKMSMIVRKF 312
            |..       |...::.|.|  :.:|:|......|..|...| :.|.:|...      ::::...
Mouse  1166 VAE-------GDTARLLCVV--AGESVNIRWSRNGLPIQADG-HRVHQSPDG------TLLIHNL 1214

  Fly   313 QKDDVGSYRCIAKNSLGEVDSSIRL-YEIPGP 343
            :..|.|||.|.|......|..|..: ..:|.|
Mouse  1215 RPRDEGSYTCSAFRGSQAVSRSTEVKVALPAP 1246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 17/82 (21%)
Ig 51..131 CDD:299845 16/82 (20%)
I-set 144..240 CDD:254352 33/147 (22%)
IGc2 159..228 CDD:197706 26/102 (25%)
Ig 244..337 CDD:299845 20/92 (22%)
I-set 244..337 CDD:254352 20/92 (22%)
PaplnNP_001192272.1 TSP1 30..81 CDD:214559
ADAM_spacer1 184..299 CDD:368694
TSP1 309..362 CDD:214559
TSP1 389..447 CDD:214559
TSP1 447..504 CDD:214559
TSP1 511..562 CDD:214559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..648
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..737
Kunitz_BPTI 771..822 CDD:333766
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..924
Papilin_u7 831..922 CDD:374683
Ig 932..>995 CDD:386229 16/74 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1024..1064 5/39 (13%)
I-set 1070..1141 CDD:369462 26/83 (31%)
Ig 1157..1241 CDD:386229 20/100 (20%)
PLAC 1257..1289 CDD:370061
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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