DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-alpha and vsig10

DIOPT Version :9

Sequence 1:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster
Sequence 2:NP_001093564.2 Gene:vsig10 / 100005564 ZFINID:ZDB-GENE-030131-7476 Length:529 Species:Danio rerio


Alignment Length:455 Identity:86/455 - (18%)
Similarity:148/455 - (32%) Gaps:161/455 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 MLIHLLLIVSLLEAIGAFQPEFVESISNVSVA-VGRDATFTC--HVRHLGGYRVGWLKADTKAIQ 84
            ::::|||:        :.|....|.:....:. .|.:.|..|  |..:.......|.|....   
Zfish     7 VVLYLLLL--------SHQTVSEEQVQQFVIGEKGNNTTLHCLDHPVNASSVLYQWKKDGAV--- 60

  Fly    85 AIHENVITHNPRVTVSHL--DQNTWNLHIKAVSEEDRGGYMCQLNTDPMKSQIGF----LDVVIP 143
                 |.|.||.....||  .:|.: |.|..:...|.|.|.|:......:|....    |.:...
Zfish    61 -----VATQNPPNPSVHLSISENGF-LRISGLQLIDEGLYECESQAKGGRSWQTLSKIQLTIAAG 119

  Fly   144 PDFISEDTS-------SDVIVPEGSSVRLTCRARGYPEPIVTWRREDGNEIVLKDN----VGTKT 197
            |..:|.|.|       ..:.|.:||:|..:|.:...|...:||..::    :..||    .|:|:
Zfish   120 PTGVSLDISPATFLNNGTLFVHKGSNVNFSCSSESNPSQNLTWTVDN----LASDNPEREFGSKS 180

  Fly   198 -LAPSFRGEVLKLSKISRNEMGSYLCIASN----------------------------------- 226
             ||       ..::.|...:.|:|.|.:.|                                   
Zfish   181 PLA-------FSITNIQPLDQGTYTCTSQNTLSRRTANKTQELLVYYAPERHPECSWELGDKPSD 238

  Fly   227 ---------GVP---------------PSV-------SKRISLSIH---FHP------------- 244
                     |.|               |::       ::.:::|::   .|.             
Zfish   239 VLFICSWFGGYPVPTLTWQEVEGAAEGPTINLTTSQQTEELNVSVNRSILHDGDKVKCTGHHVTG 303

  Fly   245 -------VIQVPNQLVGAPL-----GTDVQIECHVEAS-PKSINYWIKDTGEMIVTSGKYHVQES 296
                   .:::|.. .|.||     ||::.|.|...:| |.:...| |...::|..:.||.|||:
Zfish   304 VEKSCSFTLKIPYP-TGQPLATALEGTNITISCTETSSLPPAKTVW-KKNDDLIENTSKYIVQEN 366

  Fly   297 SQSMYETKMSMIVRKFQKDDVGSYRCIAKNSLGEVDSSIRLYEIPGPNRNKNPLNGGGKGGGAGG 361
            ..:     :::.:....|.|.|.|.|.::|.||..:..:.|          |.....|.||...|
Zfish   367 RPA-----LTLTIVNVTKADEGVYYCYSENPLGARELEVYL----------NVKTSAGNGGAIVG 416

  Fly   362  361
            Zfish   417  416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 19/84 (23%)
Ig 51..131 CDD:299845 19/84 (23%)
I-set 144..240 CDD:254352 26/173 (15%)
IGc2 159..228 CDD:197706 18/117 (15%)
Ig 244..337 CDD:299845 26/118 (22%)
I-set 244..337 CDD:254352 26/118 (22%)
vsig10NP_001093564.2 IG_like 28..116 CDD:214653 21/96 (22%)
Ig 32..104 CDD:299845 19/80 (24%)
IG_like 140..204 CDD:214653 18/74 (24%)
IGc2 143..203 CDD:197706 17/70 (24%)
IG_like 324..404 CDD:214653 23/95 (24%)
Ig 328..404 CDD:299845 23/91 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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