DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gas8 and gasr-8

DIOPT Version :9

Sequence 1:NP_001284841.1 Gene:Gas8 / 31321 FlyBaseID:FBgn0029667 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_506627.3 Gene:gasr-8 / 183553 WormBaseID:WBGene00008144 Length:410 Species:Caenorhabditis elegans


Alignment Length:411 Identity:92/411 - (22%)
Similarity:177/411 - (43%) Gaps:85/411 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PPKGKKGKK--------------GKKLPVLIDGVDTSAMTRDQLEAFALRLKAEMDREREERNYF 52
            |..|...||              .:|:..:...::...:|:|:|:..|.:|..|:.:.|.|.|..
 Worm    40 PAIGSAAKKKVQVVEPIQNQNADSRKIAEVEKKLNAIQITKDRLKDRADKLSGELTKTRVELNAA 104

  Fly    53 QLERDKIRTFWEITRQQLDETRYELQQKDKEIEATQ-DLADIDTKHV---MQQMKHLQFENHNRL 113
            |.||.:|:.||.|....|.|.|    ::.:::|.:. |:......|:   .|:::.|.|.     
 Worm   105 QQERGRIQQFWRIAENGLGEER----ERTRDVEKSMFDMKTHQATHIQKLQQRIRSLVFH----- 160

  Fly   114 GEVRAEAMTQLKLAQEHHVLQENELQR----DKRQLRRMLRERMEM-----SEMQLRQMEAHFNE 169
            .::...|.||.:.......|:..|.|.    .|.:...:||:..::     :|::..::||..:.
 Worm   161 AKMHRNAGTQSEAIAPSGGLESVECQTMEELTKEKAANILRQSDDLLVTFIAELEKEKLEAQSDL 225

  Fly   170 KL----LEQRITFERERKDNEMLHEEKMIEQKAKLDLFYGTQMFEVEERKNQQIKDLQDHHDLAF 230
            |.    ||||:..|:|.: .:.:.||:.||.: ::.|.:..|:..:|...::|...:|...|...
 Worm   226 KYAIVHLEQRMKEEQETQ-MQAMKEEREIEIE-EIGLKHMEQIRTIESGNSEQTAMMQGKIDFLQ 288

  Fly   231 NDMKNYYNDITLNNLALIGSMKEQLEHLRKQAERSDRIAADTAAENRRLKEPL-----EHANI-Q 289
            :::.|                   |..||      |.|:||......:||:..     ..||| :
 Worm   289 SEVSN-------------------LRDLR------DSISADLIDSREKLKDQAVLLGQNQANIDE 328

  Fly   290 LNEYRRKLEFYERDKQQLSRLKTRNTRLE-KKVKGLTWEAETLILRNDSLVAEREGLKERFNDVI 353
            :::...:|:.|:|:.|:..| ...|.|.| :|.|.|          ||.::.|.|.|::..:.::
 Worm   329 MSKEIARLQDYKRNFQRDMR-NVENMRKEVEKYKEL----------NDIVMGEFEKLEKERDQLL 382

  Fly   354 VELQQKTGLKNVLLERKIAAL 374
            :|:::..|...:..::|...|
 Worm   383 IEVERNVGRLEISNQQKFEKL 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gas8NP_001284841.1 GAS 221..421 CDD:290562 35/161 (22%)
gasr-8NP_506627.3 Smc 64..>409 CDD:224117 88/387 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56364
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR31543
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
33.070

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