Sequence 1: | NP_570064.1 | Gene: | CG10803 / 31320 | FlyBaseID: | FBgn0029666 | Length: | 637 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_038863.1 | Gene: | Ro60 / 20822 | MGIID: | 106652 | Length: | 538 | Species: | Mus musculus |
Alignment Length: | 616 | Identity: | 134/616 - (21%) |
---|---|---|---|
Similarity: | 245/616 - (39%) | Gaps: | 131/616 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 64 MEKEAISNQPLKDEPSKDEPNQSEGTAISTIPAIDKLRRFCFIGSTDEPVYTTPALDLVVENNFA 128
Fly 129 SLKELCSQVSED----ELVECLLSVLGSEPNEEQPPRPDEPLLILAVFFTTCEDEKKRNAVRNRF 189
Fly 190 TDLITSESDLLLFVQLVKRVQKLLERKTPFNRTVRKAVLNWYGTK-SLDRLLHFWSIGDGNRWPA 253
Fly 254 HRDLLYRLHFRHANFLPEIIAAL-RLLSSSPKELSQWPDFLTPLTSFRE---TIEGVVKLRLLTD 314
Fly 315 PEQAISIVKKLSLSWEHVPFHLLHDPRLA--HFLIPHMS----YEQLLQKWPRLSRL-------- 365
Fly 366 -------NSRVRPFAEQLLDKKKLKASNVPPVRLL--LEDMR----LR-KPKKVVNQLVLPSSLK 416
Fly 417 NKNTFKFQCATTSFQKASFLHSVYEISFGLNKALGRR----LHITLNLEQAYLGKYLSGPCRSLK 477
Fly 478 YLDALVALGFGYFRSDRKVT-VEFWHDRSGKLKALPWTNEMSVSEAKTCCENQKVGKVRQSLNEI 541
Fly 542 LFRALLDMQNT---FDVFLVLVPG---AARGNPENNSKCLAALMDKYREKRNSNAKFIMVSLRQR 600
Fly 601 QRSMIYSSGRNENLLELCSLDKHTPRLINAF 631 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG10803 | NP_570064.1 | TROVE | <197..394 | CDD:283406 | 53/224 (24%) |
Ro60 | NP_038863.1 | TROVE | 16..369 | CDD:368584 | 89/405 (22%) |
RNA-binding. /evidence=ECO:0000250|UniProtKB:P42700 | 120..284 | 43/183 (23%) | |||
VWFA-like domain. /evidence=ECO:0000250|UniProtKB:P42700 | 361..538 | 39/199 (20%) | |||
vWFA | 372..489 | CDD:238119 | 27/140 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167849764 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4465 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 61 | 1.000 | Inparanoid score | I5398 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG59608 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0007329 | |
OrthoInspector | 1 | 1.000 | - | - | oto94962 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107029 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR14202 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2766 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.790 |