DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and Slc6a2

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_112633.2 Gene:Slc6a2 / 83511 RGDID:621822 Length:617 Species:Rattus norvegicus


Alignment Length:650 Identity:225/650 - (34%)
Similarity:333/650 - (51%) Gaps:107/650 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 AELVAIATASADQQDIVEGEKEGEERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFL 157
            |:|:.:...:..|..:...:.:.:.||:|..||.|||:.:|:||.|.||||||||..||||||||
  Rat    31 ADLLVVKEHNGVQCLLASQDGDAQPRETWGKKIDFLLSVVGFAVDLANVWRFPYLCYKNGGGAFL 95

  Fly   158 VPYFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWC 222
            :||.:.|.|.|:|:||:|||:||..|:||..|| ::.|:..|:|.:..:::..|..|||.||||.
  Rat    96 IPYTLFLIIAGMPLFYMELALGQFNREGAATVW-KICPFFKGVGYAVILIALYVGFYYNVIIAWS 159

  Fly   223 LIYLLHSFESPLPWADC-----------PTRLYKNFTYDH-EPECVASSPTQFYWYRTTLQCSES 275
            |.||..||...|||.:|           |..|..:...|| :......:|...::.|..|...||
  Rat   160 LYYLFASFTLNLPWTNCGHAWNSPNCTDPKLLNASVLGDHTKYSKYKFTPAAEFYERGVLHLHES 224

  Fly   276 -----VDMPENFNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKG 335
                 :.:|:   :.:.:.|:|...::|..:.:|:.:|||:|::||..||.||.:....|:||.|
  Rat   225 SGIHDIGLPQ---WQLLLCLMVVIVVLYFSLWKGVKTSGKVVWITATLPYFVLFVLLVHGVTLPG 286

  Fly   336 AADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNC 400
            |::|:.......:..|.:..||::|.||||||||..||.||||:|||..:|||||||:|.|..||
  Rat   287 ASNGINAYLHIDFYRLKEATVWIDAATQIFFSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINC 351

  Fly   401 GTSMFAGVVVFSVIGFKATATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAFIIFT 465
            .||..:|..:||::|:.|                  ..|.:.:.|:.||      |.||.|:::.
  Rat   352 VTSFISGFAIFSILGYMA------------------HEHKVKIEDVATE------GAGLVFVLYP 392

  Fly   466 EAINQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVD--------MKLFPNLPKEYIVGAL 522
            |||:...|:..|||||||||..||:||..|.:|.|:|.|.|        .|||            
  Rat   393 EAISTLSGSTFWAVLFFLMLLALGLDSSMGGMEAVITGLADDFQVLKRHRKLF------------ 445

  Fly   523 CFSCCTISM--------CFANGAGSYIFQLMDSFAGNFPLLIIALFECLSISYIYGVRRFSDDIE 579
               .|.:::        |...| |.|:..|:|:||....:|...|.|.:.:|:.|||.|||:||:
  Rat   446 ---TCAVTLGTFLLAMFCITKG-GIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSNDIQ 506

  Fly   580 MMTGSRPNFYWMFCWKYLSPCAMVTILLAS---FYQLLTEGSSYPAWIGSKGATEGMEWPHWCIV 641
            .|.|.:|..||..|||::||..::.:::.|   |..|..:...||.|         ..|..|.|.
  Rat   507 QMMGFKPGLYWRLCWKFVSPAFLLFVVVVSIINFKPLTYDDYVYPPW---------ANWVGWGIA 562

  Fly   642 VAFFLILSSILWIPIVAVLRLCGIKVVEDSDPAWFPEAELREVHGIVPHEPTEL--ERSIFCFNM 704
                  |||::.:|...:.:...|:     ...|     .|..:||.|.....|  :|.:..|.:
  Rat   563 ------LSSMILVPAYVIYKFFSIR-----GSLW-----ERVAYGITPENEHHLVAQRDVRQFQL 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 211/576 (37%)
Slc6a2NP_112633.2 SLC5-6-like_sbd 56..615 CDD:382020 222/624 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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