DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10804 and slc6a17

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001243653.1 Gene:slc6a17 / 798635 ZFINID:ZDB-GENE-030131-8187 Length:730 Species:Danio rerio


Alignment Length:654 Identity:262/654 - (40%)
Similarity:378/654 - (57%) Gaps:84/654 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 ESSELEQD-----PPPFGSEASTSKAKAELVAIATASADQQDIVEGEKEGEERESWDSKIMFLLA 130
            :||::..:     .||.|                     :.||....::|  |.:|:||:.::||
Zfish    34 KSSQMSMNMTGGSAPPIG---------------------KPDISPDLEDG--RPAWNSKLQYILA 75

  Fly   131 TIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVSP 195
            .:|::||||||||||||.|||||||:||||||:|.:.|||:|:||||:|||:|:|:||||:.|.|
Zfish    76 QVGFSVGLGNVWRFPYLCQKNGGGAYLVPYFILLILIGIPLFFLELAVGQRIRRGSIGVWNYVCP 140

  Fly   196 YLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPTRLYKNFTYD-HEPECVASS 259
            .|||||.||.:|...|.||||.||.|.:.|...||:.||||:|||.|  ||.:.. .||||..||
Zfish   141 RLGGIGASSLMVCGFVGLYYNVIIGWSIFYFFQSFQYPLPWSDCPIR--KNGSQAIVEPECEKSS 203

  Fly   260 PTQFYWYRTTLQCSESVDMPENFNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLI 324
            .|.::|||.||..:.::......|:.|.::|:.:|.:|.:.:::||.||||::|.:::||||||.
Zfish   204 ATTYFWYRETLNITSTIADSGGLNWRMTLSLLAAWIIVCLAVIKGIQSSGKVMYFSSLFPYVVLF 268

  Fly   325 IFFFRGITLKGAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCY 389
            .|..||:.||||.||:||:|||:.|.:|:|.||.||.||:||:|||.|||:|||||||..:|||:
Zfish   269 CFLVRGLFLKGAVDGIAHMFTPKLEIMLEPQVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCH 333

  Fly   390 RDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEER--------NGLVAQ--------NKT 438
            .||:|||:.|..||:.|.:|||:|:||||....::|..|.        |..|..        |.:
Zfish   334 FDAVLVSVINFLTSILATLVVFAVLGFKANIMNEKCVVENAEKILGYLNSNVLSHDLIPPHVNFS 398

  Fly   439 H------------------------NLPVCDLQTELANSASGTGLAFIIFTEAINQFPGAQLWAV 479
            |                        .|..|.|:.||..:..|||||||.||||:..||.:..|:|
Zfish   399 HLTTSDYAEMYGVIKIVKEDSFAQLGLEQCLLEDELNKAVQGTGLAFIAFTEAMTHFPASPFWSV 463

  Fly   480 LFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNLPKEYIVGALCFSCCTISMCFANGAGSYIFQL 544
            :||.||..||:.|..||:.|:.|.::|..   .:.|||:....|.......:.|...:|:|...:
Zfish   464 MFFFMLINLGLGSMIGTMTGITTPILDTF---KIRKEYLTVGCCIVAFLCGLLFVQRSGNYFVTM 525

  Fly   545 MDSFAGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYWMFCWKYLSPCAMVTILLAS 609
            .|.::...||.|:.:.|.:|:::|||.:||..|:|.|.|.||...:.:.|||:||..::.::.||
Zfish   526 FDDYSAGLPLTIVVILENVSVAWIYGTKRFMQDLEDMLGFRPYSVYFYLWKYVSPVCLIILISAS 590

  Fly   610 FYQLLTEGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIPIVAVLRLCGIKVVEDSDPA 674
            ..::......|.||:..........:|.|.||:.|.||:.::|.:|:|.:.|...          
Zfish   591 VVEMAISPLGYNAWVQDLAMERFQSYPPWAIVMCFALIIVAMLPLPLVFIARHFN---------- 645

  Fly   675 WFPE 678
            |.|:
Zfish   646 WLPD 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 250/581 (43%)
slc6a17NP_001243653.1 SLC5-6-like_sbd 63..651 CDD:294310 254/602 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48419
OrthoDB 1 1.010 - - D251682at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101967
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.