DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10804 and slc6a11a

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001091857.1 Gene:slc6a11a / 558960 ZFINID:ZDB-GENE-030131-3729 Length:590 Species:Danio rerio


Alignment Length:636 Identity:216/636 - (33%)
Similarity:315/636 - (49%) Gaps:104/636 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 QQDIVEGEKEGEERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGI 169
            |.||..     |||..|.:||.|||...|..:|||||||||||..|||||||.:||.:.|...||
Zfish    13 QADITP-----EERGQWANKIEFLLTVAGAIIGLGNVWRFPYLCYKNGGGAFFIPYVLYLVTCGI 72

  Fly   170 PIFYLELAIGQRLRKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPL 234
            |:|.||.::||...:|.|..|.:|.|...|:|.:|.::....::.|..||||..:||..||...|
Zfish    73 PLFVLETSLGQYTSQGGIMCWRKVCPLFEGMGYASQLIIVYGSITYIIIIAWAFLYLFSSFNVEL 137

  Fly   235 PWADCPTRLYKNFTYDHEPECV----------------ASSPTQFYWYRTTLQCSESVDMPENFN 283
            |||.|      |..::.: .|:                :||....:|:...|:.|..|:......
Zfish   138 PWASC------NNPWNTD-TCIVLSGRNSSSELASPLNSSSSVMEFWHHRVLRLSSGVEHLGTVR 195

  Fly   284 YHMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKGAADGVAHLFTPRW 348
            :.:|:.|::.|.|||.|:.:|:.|:||.||.||.||||:|:|...||:||.||.:|:.:...|..
Zfish   196 WDLALILLLVWILVYFCIWKGVKSTGKAVYFTATFPYVMLLILLLRGVTLPGALNGIYYYMYPDL 260

  Fly   349 ETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNCGTSMFAGVVVFSV 413
            ..|.||.||::||||||:|..:..|.|.:..|||..|||||||:..:.|.|.|||...|..:|||
Zfish   261 TRLADPQVWMDAGTQIFYSYAICLGYLSSLGSYNQYNNNCYRDSFYLCLLNSGTSFLGGFAIFSV 325

  Fly   414 IGFKATATFDRCTEERN---GLVAQNKTHNLPVCDLQTELANSASGTGLAFIIFTEAINQFPGAQ 475
            :|..|        :|:.   .|||:                   ||.||.||::.:|:...|.:|
Zfish   326 LGHMA--------QEQGVDISLVAE-------------------SGPGLVFIVYPQAVTMLPLSQ 363

  Fly   476 LWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNL-----PKEYIVGALCFSCCTISMCFAN 535
            .|||.||:|:..||:||||..||.::||:.|  :||.:     .:|.::..:|..|..:.:....
Zfish   364 FWAVCFFIMIILLGLDSQFVGLESIMTSVTD--IFPTVLRRGFRREMLLLGICLVCYFMGLLMIT 426

  Fly   536 GAGSYIFQLMDSF-AGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYW---MFCWKY 596
            ..|.||.||.|.: .....||.:|..:.::|.::||..||.::|:.|.|.:|   |   .:||.|
Zfish   427 EGGLYIIQLFDHYVCSGTTLLFLATCQSVAIGWVYGADRFYENIQDMIGYKP---WPMVKYCWLY 488

  Fly   597 LSPCAMVTILLASF--YQLLTEGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIPIVAV 659
            ::|...|...:.|.  |..|...:.|             .:|.|...:.:||.:||:..|||..:
Zfish   489 VTPSVCVGTFIFSLVKYSPLKFNNKY-------------MYPWWAYGIGWFLAVSSLSLIPINMI 540

  Fly   660 LRL------------CGIKVVEDSDPAWFPEAELREVHGIVPHEPTELERS 698
            .:|            ......||     .|:::....|.......|:.|:|
Zfish   541 YKLHKGKGTFWERLQLACSPAED-----LPQSQRPSAHHYTLSASTDREKS 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 202/570 (35%)
slc6a11aNP_001091857.1 SLC6sbd-TauT-like 21..560 CDD:271387 204/590 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.