DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10804 and Slc6a8

DIOPT Version :10

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_059044.1 Gene:Slc6a8 / 50690 RGDID:619711 Length:635 Species:Rattus norvegicus


Alignment Length:570 Identity:224/570 - (39%)
Similarity:312/570 - (54%) Gaps:78/570 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 RESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRL 182
            ||:|..::.|:::.:|:|||||||||||||..|||||.||:||.::..:.|||||:||:::||.:
  Rat    52 RETWTRQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFM 116

  Fly   183 RKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWA---------- 237
            :.|:|.||: :.|...|:|.:|.|:.:....||..::||...||:.||.:.||||          
  Rat   117 KAGSINVWN-ICPLFKGLGYASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCGHTWNTPD 180

  Fly   238 --------DCPTRLYKNFTYDHEPECVASSPTQFYWYRTTLQCSESVDMPENFNYHMAIALIVSW 294
                    ||......|.|.|...:  ..||...:|....|:.|..:::|...|:.:.:.|:..|
  Rat   181 CVEIFRHEDCANASLANLTCDQLAD--RRSPVIEFWENKVLRLSTGLEVPGALNWEVTLCLLACW 243

  Fly   295 FLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDPVVWLE 359
            .|||.|:.:|:.|:|||||.||.||||||::...||:.|.||.||:.:...|.|..|..|.||::
  Rat   244 VLVYFCVWKGVKSTGKIVYFTATFPYVVLVVLLVRGVLLPGALDGIIYYLKPDWSKLGSPQVWID 308

  Fly   360 AGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDR 424
            ||||||||..:..|.|.|..|||..|||||:|||:::|.|.|||.|||.||||::||.||     
  Rat   309 AGTQIFFSYAIGLGALTALGSYNRFNNNCYKDAIILALINSGTSFFAGFVVFSILGFMAT----- 368

  Fly   425 CTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAFIIFTEAINQFPGAQLWAVLFFLMLFTLG 489
                      :...|...|.:         ||.|||||.:..|:...|.|.|||.|||.||..||
  Rat   369 ----------EQGVHISKVAE---------SGPGLAFIAYPRAVTLMPVAPLWAALFFFMLLLLG 414

  Fly   490 IDSQFGTLEGVVTSLVDMKLFPNLPKEY-------IVGALCFSCC-TISMCFANGAGSYIFQLMD 546
            :||||..:||.:|.|:|:     ||..|       |..|||.:.| .|.:......|.|:|||.|
  Rat   415 LDSQFVGVEGFITGLLDL-----LPASYYFRFQREISVALCCALCFVIDLSMVTDGGMYVFQLFD 474

  Fly   547 SF-AGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYWMFCWKYLSP--CAMVTILLA 608
            .: |....||..|.:||:.::::||..||.|||..|.|.||..:..:||.:.:|  |..:.|...
  Rat   475 YYSASGTTLLWQAFWECVVVAWVYGADRFMDDIACMIGYRPCPWMKWCWSFFTPLVCMGIFIFNV 539

  Fly   609 SFYQLLTEGSS--YPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIPI 656
            .:|:.|...::  ||.|      .|.|.|       ||  .|||:|.:|:
  Rat   540 VYYKPLVYNNTYVYPWW------GEAMGW-------AF--ALSSMLCVPL 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 222/568 (39%)
Slc6a8NP_059044.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47
SLC6sbd_CT1 52..621 CDD:271397 224/570 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.