DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and Slc6a12

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_059031.1 Gene:Slc6a12 / 50676 RGDID:620255 Length:628 Species:Rattus norvegicus


Alignment Length:632 Identity:219/632 - (34%)
Similarity:325/632 - (51%) Gaps:90/632 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 GATNQGFMSDAFDESSELEQDPPPFGSEASTSKAKAELVAIATASADQQDIVEGEKEGEERESWD 122
            ||..:.....:.|....:.:|..|.   .|....:.|::       ||:|    :.:.::|..|.
  Rat     4 GAWEERVSLSSMDRKVTVHEDGCPV---VSWVPEEGEMM-------DQKD----KDQVKDRGQWT 54

  Fly   123 SKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAI 187
            :|:.|:|:..|..:|||||||||||..|||||||.:||||.....|||:|:||:|:||...:|::
  Rat    55 NKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFSCGIPVFFLEVALGQYSSQGSV 119

  Fly   188 GVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPTRLYKNFTYDHE 252
            ..|.::.|.|.|||::|.|:...:.:||..|:||.|.||..||...|||..|.    .::..:| 
  Rat   120 TAWRKICPLLQGIGMASVVIESYLNIYYIIILAWALFYLFSSFTWELPWTTCT----NSWNTEH- 179

  Fly   253 PECV----------------ASSPTQFYWYRTTLQCSESVDMPENFNYHMAIALIVSWFLVYICM 301
              ||                .:||...:|.|..|..:..:....:..:.:|:.|:::|.:.|.|:
  Rat   180 --CVDFLNYSSTRAASYSENFTSPVMEFWERRVLGITSGIHDLGSLRWELALCLLLAWIICYFCI 242

  Fly   302 VQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDPVVWLEAGTQIFF 366
            .:|:.|:||:||.||.|||::|||...||:||.||..|:.....|....|.||.||::|||||||
  Rat   243 WKGVKSTGKVVYFTATFPYLMLIILLIRGVTLPGAYQGIVFYLKPDLLRLKDPQVWMDAGTQIFF 307

  Fly   367 SLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEERNG 431
            |..:..|.|.|..|||..:||||||:|.:...|..||..||.||||::||.|             
  Rat   308 SFAICQGCLTALGSYNKYHNNCYRDSIALCFLNSATSFVAGFVVFSILGFMA------------- 359

  Fly   432 LVAQNKTHNLPVCDLQTELANSASGTGLAFIIFTEAINQFPGAQLWAVLFFLMLFTLGIDSQFGT 496
                 :...:|:.::      :.||.|||||.|.:|:...|.:|||:.||||||..||:||||..
  Rat   360 -----QEQGVPISEV------AESGPGLAFIAFPKAVTMMPLSQLWSCLFFLMLLFLGLDSQFVC 413

  Fly   497 LEGVVTSLVDMKLFPNL-----PKEYIVGALCFSCCTISMCFANGAGSYIFQLMDSFAGN-FPLL 555
            :|.:||:.:||  ||..     .:|.::.|:...|..:.:......|.|||||.|.:|.: ..||
  Rat   414 MECLVTASMDM--FPQQLRKRGRRELLILAVAIVCYLMGLLLVTEGGMYIFQLFDYYASSGICLL 476

  Fly   556 IIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYW---MFCWKYLSP--CAMVTILLASFYQLLT 615
            .::|||.:.|.::||..||.|::|.|.|.||   |   ...|.:|:|  |........|.|..|.
  Rat   477 FLSLFEVICIGWVYGADRFYDNVEDMIGYRP---WPLVKISWLFLTPGLCLATFFFSLSKYTPLK 538

  Fly   616 EGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIPIVAVLRL 662
            ..:.|             .:|.|...:.:.|..||:..:|:..::.|
  Rat   539 YNNVY-------------IYPSWGYSIGWLLAFSSMACVPLFIIITL 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 207/567 (37%)
Slc6a12NP_059031.1 SLC5-6-like_sbd 49..589 CDD:294310 209/573 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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