DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10804 and Slc6a21

DIOPT Version :10

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001102616.1 Gene:Slc6a21 / 499151 RGDID:1562492 Length:743 Species:Rattus norvegicus


Alignment Length:643 Identity:192/643 - (29%)
Similarity:312/643 - (48%) Gaps:72/643 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 MSDAFDESSELEQDPPPFGSEASTSKAKAELVAIATASADQQDIVEGEKEGEERESWDS------ 123
            |..:|:|..|.:::.|.  .|..|:..|         |.|...:..|.|..|.|.:..|      
  Rat     1 MDQSFEEVPEPKKEEPT--EEEPTASKK---------STDPTSLSWGFKTREVRITKISSHFQAK 54

  Fly   124 KIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAIG 188
            |...:|..:.:::|||:.||||||..:||||:||:.|.|:|.:.|||:.|:|:.|||.||...|.
  Rat    55 KTENILILVAFSIGLGSTWRFPYLCHQNGGGSFLLMYLILLLLLGIPLMYMEMVIGQWLRVDNIR 119

  Fly   189 VWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPTRLYKNFTYDHEP 253
            .|..:.|:|.|:|.||.:...:|.||.:.:::|.|.||..||:.|.||.:||  |.|||: ..:.
  Rat   120 AWKHLVPWLSGVGYSSMLACALVILYNSALVSWSLFYLGQSFDYPTPWENCP--LVKNFS-TSDI 181

  Fly   254 ECVASSPTQFYWYRTTLQCSESVDMP-ENFNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAI 317
            .|:.:.|.||:||.|.|:.|:.::.. |....::.:.|..:||.:||.||..|..|..::..:.:
  Rat   182 SCLRTEPHQFFWYHTVLRASDQIEEGIEVLVLNVTLCLFATWFFLYITMVTRIKISVLMMIFSIL 246

  Fly   318 FPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYN 382
            ||.|:|..||.....:||..|.:..|.|.....|.....|.:||..:.:||||..|.:|.||||.
  Rat   247 FPNVLLFCFFTHIFFVKGVRDSLKRLVTTELSILASLDAWRQAGGHVLYSLGLGMGTIITFSSYQ 311

  Fly   383 PANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEER---------NGLVAQ--- 435
            ....|..:.|..|::.|..||:.:..|:|.::||....:...|.|..         ||::.|   
  Rat   312 TRGENYIKWASFVAMVNLMTSLLSSSVIFLMLGFWIENSGTPCVESNVSNLLSLIANGVLPQVAW 376

  Fly   436 ---NKTHNLPV-----------------------CDLQTELANSASGTGLAFIIFTEAINQFPGA 474
               :..|..|:                       |.:..:......|.|||::.|::||..|||:
  Rat   377 PPKDIIHRSPLEYLDWISQLPKNIRNEVAHFTLPCSILVQKEKFMEGPGLAYVAFSQAITLFPGS 441

  Fly   475 QLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNLPK--EYIVGALCFSCCTISMCFANGA 537
            ..||::||:.|..:|:.:....:||:..||  .|....|.|  :.:...:|......|:.|::..
  Rat   442 SFWAIIFFMSLVIMGLGTMTTLVEGIALSL--QKSISTLEKHPKLVPVIICLGGFLGSLVFSSRP 504

  Fly   538 GSYIFQLMDSFAGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYW---MFCWKYLSP 599
            |||:..|.|.......|::|..|:.||::::||::||..:   |.|......|   .|.|.|::.
  Rat   505 GSYVVFLFDDHLVPMVLIMIVAFQNLSLAWVYGIKRFRAE---MFGQLGRLVWAPFTFLWSYVTL 566

  Fly   600 CAMVTILLASFYQL-LTEGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIPI 656
            ..::.:|...|..| .:|..||.:|  :...::.::.|:..|.:.:...||.:..:||
  Rat   567 PTLLVLLTIYFLNLYFSESLSYVSW--NNSMSQEVKQPYQRIALGWVTFLSVLALLPI 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 178/588 (30%)
Slc6a21NP_001102616.1 SLC5-6-like_sbd 50..621 CDD:444915 175/580 (30%)

Return to query results.
Submit another query.