DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10804 and slc6a1b

DIOPT Version :10

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_001007363.1 Gene:slc6a1b / 492490 ZFINID:ZDB-GENE-041114-57 Length:600 Species:Danio rerio


Alignment Length:588 Identity:232/588 - (39%)
Similarity:333/588 - (56%) Gaps:59/588 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 GSEASTSKAKAELVAIATASADQQDI---VEGEKEGEERESWDSKIMFLLATIGYAVGLGNVWRF 144
            |::||......|:....||:...:.:   |:.:||..:||:|..|..|||:.:|||:||||||||
Zfish     5 GTKASDGHVLTEVNEAPTANDKPKTLVVKVQKKKELPDRETWQGKFDFLLSCVGYAIGLGNVWRF 69

  Fly   145 PYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVSPYLGGIGISSAVVSY 209
            |||..||||||||:|||:.|...|:|:|:||.|:||....|.:||| :::|...|:|:::||:|:
Zfish    70 PYLCGKNGGGAFLIPYFLTLIFAGVPLFFLETALGQYTSIGGLGVW-KLAPMFKGVGLAAAVLSF 133

  Fly   210 IVALYYNTIIAWCLIYLLHSFESPLPWADCPT-----RLYKNFTYDHEPECVASSPTQFYWYRTT 269
            .:.:||..||||.:.||.:||.:.|||..|..     :.:.|::..:... :.|:..:| |.|..
Zfish   134 WLNIYYIVIIAWAIYYLYNSFTTDLPWKSCDNPWNTDKCFSNYSMANIGN-MTSAVVEF-WERNM 196

  Fly   270 LQCSESVDMPENFNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLK 334
            .|.::.::.|......:||.|.::|.|||.|:.:|:..:||:||.:|.:||.:|.|.|.||:||.
Zfish   197 HQLTDGLEKPGEIRLPLAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYFMLFILFIRGVTLP 261

  Fly   335 GAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTN 399
            ||.:|:....||.:..|.:..|||:|.||||||.||..|.|||..||||.|||.|:|:|:|...|
Zfish   262 GAKEGILFYVTPEFSKLKESEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYKDSIIVCCIN 326

  Fly   400 CGTSMFAGVVVFSVIGFKATATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAFIIF 464
            ..||||||.|:||::||.|..|                  ..|:.|:      :|||.||||:.:
Zfish   327 SFTSMFAGFVIFSIVGFMAHIT------------------KRPIADV------AASGPGLAFLAY 367

  Fly   465 TEAINQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNL---PKEYIVGALCFSC 526
            .||:.|.|.:.|||||||.||..|||||||.|:||.:|:|||.  ||..   .:|..:..:|...
Zfish   368 PEAVTQLPISPLWAVLFFSMLLMLGIDSQFCTVEGFITALVDE--FPRALRGRREIFIAVVCLVS 430

  Fly   527 CTISMCFANGAGSYIFQLMDSF-AGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYW 590
            ..|.:......|.|:|:|.|.: |....||.:..|||:|||:.|||.:|..::|.|.|.:|..:|
Zfish   431 YLIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFECVSISWFYGVNKFYGNLEEMIGYKPCIWW 495

  Fly   591 MFCWKYLSPCAMVTILLASFYQ---LLTEGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSIL 652
            ..||...:|..:..:.|.|..|   |......:|.|....|         ||      :.|||::
Zfish   496 KLCWVVFTPLIVAGVFLFSAVQMVPLTLNNYVFPKWGQGVG---------WC------MALSSMV 545

  Fly   653 WIP 655
            .||
Zfish   546 LIP 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 221/548 (40%)
slc6a1bNP_001007363.1 SLC5-6-like_sbd 2..600 CDD:444915 232/588 (39%)

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