DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10804 and Gat

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster


Alignment Length:673 Identity:237/673 - (35%)
Similarity:346/673 - (51%) Gaps:120/673 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 MSDAFDESSELEQDPPPFGSEASTSKAKAELVAIATASADQQDIVEGEKEGEERESWDSKIMFLL 129
            ||.....::.|:...|                 ..|.::::|.:|:.| :..:|.||.||:.|:|
  Fly    23 MSKELGHTTSLQSSSP-----------------TTTDTSNKQQLVKIE-QLPDRGSWSSKMDFIL 69

  Fly   130 ATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVS 194
            :.:|.|:|||||||||||..|||||||::||.|.|.:.|||:|::|||:||.|..|.:||: :::
  Fly    70 SVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVF-KIA 133

  Fly   195 PYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPT------------------ 241
            |...|||.::||:|..:.:||..|:||.:.|...|..:.:||..|..                  
  Fly   134 PIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLHC 198

  Fly   242 --RLYKNFTYDHEPECVASS----------PTQFYWYRTTLQCSESVDMPENFNYHMAIALIVSW 294
              ::....|   :..|..|:          |.:.:|.|..||.|..::...|..:.:|..|::.|
  Fly   199 WDKIINGTT---QKVCSVSALNITSLELTDPVKEFWERRALQISHGIEEIGNIRWELAGTLLLVW 260

  Fly   295 FLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDPVVWLE 359
            .|.|.|:.:|:..:||:||.||:||||:|.|...|||||.||.:|:.....|.:..|.:..||::
  Fly   261 ILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEVWID 325

  Fly   360 AGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDR 424
            |.||||||.||..|.|:|..|||...||.|:||::|...|..||||||.|:||||||.|      
  Fly   326 AVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGFMA------ 384

  Fly   425 CTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAFIIFTEAINQFPGAQLWAVLFFLMLFTLG 489
             .|::.           ||.|:      :|||.||||:::..|:.|.||:.:|:.|||.||..:|
  Fly   385 -HEQQR-----------PVADV------AASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIG 431

  Fly   490 IDSQFGTLEGVVTSLVDMKLFPNL---PKEYIVGALCFSCCTISM-CFANGAGSYIFQLMDSFA- 549
            :||||.|:||.:|:::|.  :|.|   .||..:..:|.....:.: |...| |.||||::||:| 
  Fly   432 LDSQFCTMEGFITAIIDE--WPQLLRKRKEIFIAIVCALSYLVGLTCITQG-GMYIFQILDSYAV 493

  Fly   550 GNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNFYWMFCWKYLSPCAMVTILLASFYQLL 614
            ..|.||.:..|||:|||:.|||.||.|.|:.|.|..|..:|.|||...:|...:.:...:..|  
  Fly   494 SGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQ-- 556

  Fly   615 TEGSSYPAWIGSKGATEGMEWPHWCIVVAFFLILSSILWIP-----------------IVAVLRL 662
                    |...|.......|  |.....:|..|||:|:||                 |.|::|:
  Fly   557 --------WTPVKYLDYSYPW--WAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVRI 611

  Fly   663 CGIKVVEDSDPAWFPEAELREVH 685
                   |.|.....|..|||.:
  Fly   612 -------DEDVTRLREKMLREAY 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 221/592 (37%)
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 222/595 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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