DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10804 and CG4476

DIOPT Version :9

Sequence 1:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster
Sequence 2:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster


Alignment Length:579 Identity:198/579 - (34%)
Similarity:304/579 - (52%) Gaps:89/579 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 KAELVAIATASADQQDIVEGEKEGEERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAF 156
            |..|:.:|..|:      |...:.:.|::|.|.:.||::.|..:||||||||||:.|.:||||||
  Fly    31 KPSLLPMALESS------ELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAF 89

  Fly   157 LVPYFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAW 221
            |:||.::|.:.|.||:|:|:.:||...:|.:.|: ..:|.:.|:|.:..:...::|.||.:::|.
  Fly    90 LIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMAL 153

  Fly   222 CLIYLLHSFESPLPWADC-----------------PTRLYKNFTYDHEPECVASSPTQFYWYRTT 269
            .|.|...||.|.|||:.|                 ..:|.:||          ||.||.|..|..
  Fly   154 TLRYFFDSFASELPWSFCREEWGDGCVSASGGQPLQGQLSRNF----------SSSTQLYLQRIV 208

  Fly   270 LQCSESVDMPENFNY---HMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGI 331
            |..::|::  |...|   .:|:.|.:||..|.:.:::|:.||||..|:.|:|||||:.|...|.:
  Fly   209 LNETDSLE--EGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRAL 271

  Fly   332 TLKGAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVS 396
            ||.||.|||.:..||:||.||:|.||..|.||:||||.:.||.:|.:||||...:|.||||.:|:
  Fly   272 TLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVT 336

  Fly   397 LTNCGTSMFAGVVVFSVIGFKATATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAF 461
            ..:..||:.:||::|.::|                    |..|.....|:.:.:   .:|.||||
  Fly   337 TLDTFTSLLSGVIIFGILG--------------------NLAHESGTKDIASVV---KAGPGLAF 378

  Fly   462 IIFTEAI---NQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNLPKEYIVGALC 523
            |.:.:||   ..||  |::::|||.|||.||:.|..|.:..::|.|.|.  |.|:....||.:|.
  Fly   379 ISYPDAIAKFKMFP--QVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQ--FVNVKLWIIVVSLS 439

  Fly   524 FSCCTISMCFANGAGSYIFQLMDSFAGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNF 588
            .....:.:.:....|.:|..|||.....|..|:.|:||.:::.:|||.:|...|.|.|...:.:.
  Fly   440 VIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSN 504

  Fly   589 YWMFCWKYLSPCAMVTILLASFYQLLT-EGSSYPAWIGSKGATEGMEWP------HWCI 640
            |:..||..::|..|:.||:   |.||| ...||          .|.|:|      .||:
  Fly   505 YYRICWSIVTPLVMLVILV---YSLLTMRPLSY----------NGQEFPLVYRVVGWCV 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 192/551 (35%)
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 182/516 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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